Hemiscyllium ocellatum (epaulette shark): 132823488
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Entry
132823488 CDS
T09720
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010
MAPK signaling pathway
hoc04020
Calcium signaling pathway
hoc04510
Focal adhesion
hoc04540
Gap junction
hoc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132823488 (pdgfrb)
04020 Calcium signaling pathway
132823488 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132823488 (pdgfrb)
04540 Gap junction
132823488 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
132823488 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hoc01001
]
132823488 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hoc04090
]
132823488 (pdgfrb)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
132823488 (pdgfrb)
Protein kinases [BR:
hoc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
132823488 (pdgfrb)
CD molecules [BR:
hoc04090
]
Proteins
132823488 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
VEGFR-1-like_Ig-like
ig
V-set
Motif
Other DBs
NCBI-GeneID:
132823488
NCBI-ProteinID:
XP_060693390
LinkDB
All DBs
Position
16:complement(75988074..76119948)
Genome browser
AA seq
1088 aa
AA seq
DB search
MDFPKGKFPTAEIFSSRFPRSYLRTSPFRWSLFIAVCLLTFTFGECSQSHLKPKEIILQP
SSNITLNCSGNGHIHWSYEKVADVYPDGRFLHIRNATIYHNREYTCFSNKTEIMSFYIFV
PDPNMWFLPQRPDDMIIIMESSVSFNIPCLVSNPDLKVTLLHVETNTLVDLPYNNKQGFF
GKFKGGTYVCKATLNGVEQQSESYIVDTYEAPDHLYIELHAARTLVKQGEPISVTCTANT
NLLEYNWNCPRLKEAQITVSDGAQEVNSTLYLESAMLEDSGWYNCSVIGYHTLNQFEEKA
LQITVVRNGFVHLNTNLSAIEYAELSEVKIFVVNLTAYPEPTVKWLKDNVPFNEKSNQVT
FTKKSLGKNRYQCALHLIRVKEEDFGNYSIQVWNADSKEEFTFSLRVNVPARILELNDFH
QLNGIQTVTCVTEGLPLPEVTWYTCHDLKRCNNKVGKWNPLKINSSGIQVEKRISELPGN
RVFRVESVLIRKNVDETAAMRCSANNGFGTVSRDVKLISHGIQSQLVTVATILVLLVIIV
ISLVVLVVVWRKKPRYEIRWKVIESISSDGHEYIYVDPMQLPYDSSWEFPRNQLSLGRTL
GSGAFGRVVEAMAHGLGHSNSTMKVAVKMLKTTARTSEKQALMSELKIMSHLGPHLNIVN
LMGACTKGGPIYIITEYCRHGDLVDYLYRNKHTFLQHYADKGQRESNNVITNSYNERMKS
YVALSFENDGGYMDMTKDEKLEYMPMLEAKREPNYADIEHPDYNRPYSQETSSHTEHEVT
ENKLLISESPILTYTDLVGISYQVAQGMEFLSLKNCVHRDLAARNVLICEGKLAKICDFG
LARDIMNDSNYISRGSTFLPLKWMAPESIFNNLYTTLSDVWSYAVLLWEIFTLGGTPYPE
LPVNDQFYNAIRRGYRMPKPQYASDEIYQIMQKCWNDEFEKRPSFSTLVTHIGNQLSEGY
KKKYAQVNQDFLKGDHPAIGRAGAKFFQVNDNVIYSNCTEGLPNGTNNGYIIPLPDPEPH
EVSADTSSPIENSPSESAAGTRPSSLVCGENGELADSSDSAPVTEDPKELEVDTEADTSV
LDVEDSFL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccaaaaggaaagtttcccaccgccgagatcttcagcagccgcttcccacga
tcatatttgaggacctccccctttcgatggagtctttttattgcagtgtgcctgctgaca
ttcacatttggtgaatgttctcaaagtcacttgaaaccgaaagagatcattctgcaaccg
tcgtccaatatcactctgaactgttccgggaatggccacattcattggagttatgagaaa
gtcgctgatgtctatcctgatggccgttttctgcacatacgtaacgcaaccatttatcac
aacagagagtacacctgcttcagtaataaaaccgagataatgagcttttacatctttgtg
ccagatcctaacatgtggttccttccacaacggccagatgacatgatcatcataatggaa
agttcagtgtcttttaacattccatgcctggtgtccaatccagatctcaaggtcactcta
ctgcacgtggaaactaacacccttgtagacctgccatacaacaacaagcaaggctttttt
gggaaattcaaaggtgggacctatgtgtgcaaagctacactaaatggagtggagcaacag
tctgagagttacattgtggacacatatgaagcacctgaccatctttatattgaacttcat
gctgcaagaaccctggtcaaacagggagaacccatcagtgtcacctgtactgcaaatacc
aacttgctggaatataattggaactgcccaaggttgaaggaagctcaaataactgtgtct
gacggggctcaggaagtgaactccaccctctacttggaaagcgccatgctggaagattcc
ggatggtacaactgcagtgtcatagggtaccacactctaaatcaatttgaagagaaggct
ctgcaaattaccgttgtcagaaatggatttgttcatctcaacaccaatctgagtgccatt
gagtatgcagagctgtcagaggtgaaaatatttgtggttaatttaactgcctatccagaa
cctactgtcaagtggctgaaagacaacgtaccattcaacgaaaagtccaatcaagtgaca
tttaccaaaaaatctctgggcaaaaacaggtatcagtgcgcactccatctcatccgtgtg
aaggaagaagattttgggaattatagcattcaagtgtggaatgctgacagcaaagaggag
tttaccttctctttaagagtaaatgtgccagctaggatcctggaactcaatgactttcac
caactgaatggtatccagactgtgacctgtgttactgagggattgcctttaccagaagtc
acctggtatacatgccatgacctgaaaaggtgcaacaataaggtggggaagtggaatcca
ctgaaaatcaactcgagtggaatccaggtggagaagcggatctctgagctgccaggaaac
cgggtcttccgtgtagagagtgttctcatccggaagaatgtggatgaaactgctgcgatg
cgctgctccgccaataatggctttgggaccgtgagccgggatgtcaagcttatttcccat
ggtatccagtctcagctggtcactgtggccaccatcctggttttgttggtcatcattgtc
atctcattagtggtcctggttgtggtttggcggaagaagcctcgctatgaaattcgctgg
aaggtcattgaatccatcagttcggatggacacgagtacatttacgttgacccaatgcaa
cttccatacgattcaagctgggagttccccaggaaccagctttctctgggtcgaacgttg
ggctctggagcgtttggcagggtggttgaagcaatggcccatggactcggtcactcaaac
tccaccatgaaagttgctgtaaagatgttgaaaactactgcaaggaccagtgagaaacaa
gccctgatgtcggagctgaaaattatgagtcaccttggcccccatttaaatattgtcaat
ctaatgggagcctgtaccaaaggaggtccaatctacatcattacggagtactgtcgccat
ggcgatctggtggattatctgtacaggaataaacataccttcctacagcactatgctgac
aaagggcagagagagtcaaacaatgtcatcacaaactcctacaatgagaggatgaagagt
tatgtggccctgtcgtttgagaatgatggagggtacatggacatgactaaagatgagaag
cttgagtacatgccaatgctggaggctaaacgtgaaccaaactatgctgatatcgagcac
cccgactacaacaggccatactcacaggagacaagctcccacactgagcatgaggtcaca
gagaataagctactgatcagcgagtctccgattctgacctacacggatcttgttgggatc
agttatcaggtggcacaaggaatggaattcctttcgttgaaaaattgtgtccatcgggat
ttggctgcaaggaatgtactgatctgtgaaggaaaactcgcaaaaatctgtgactttgga
ttagcaagagacataatgaatgattctaattatatttcaagaggcagtacctttttgcct
ctgaaatggatggcaccggagagcattttcaacaacctatacaccacactgagcgatgtc
tggtcctacgcagtcctgctctgggagatcttcaccctcggtgggacaccatatccagag
cttcctgtcaatgaccaattctacaatgccattaggcgtgggtacagaatgcccaaacct
cagtacgcctcagatgaaatatatcaaatcatgcaaaagtgttggaatgatgagtttgag
aaaagaccttcattttcaactttagtaacccacataggaaatcagctcagtgagggctac
aagaagaaatatgcccaggttaaccaggactttctgaagggtgatcacccagccataggt
cgcgccggggctaagttcttccaagttaacgacaacgtgatctactccaactgtactgag
gggctgcccaatggcaccaataatggctatatcatcccactgccggaccctgagccccat
gaggtgtctgcagacactagcagtccgatagagaactctccgagtgagtctgctgcagga
acaaggccaagttcccttgtgtgtggggagaatggagagctggctgactccagtgattct
gctccggtgactgaagaccctaaggagcttgaggtggacactgaagctgacactagtgtg
ctggacgttgaggacagtttcctgtga
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