Hemiscyllium ocellatum (epaulette shark): 132825167
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Entry
132825167 CDS
T09720
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010
MAPK signaling pathway
hoc04020
Calcium signaling pathway
hoc04510
Focal adhesion
hoc04540
Gap junction
hoc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132825167
04020 Calcium signaling pathway
132825167
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132825167
04540 Gap junction
132825167
09142 Cell motility
04810 Regulation of actin cytoskeleton
132825167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hoc04052
]
132825167
00536 Glycosaminoglycan binding proteins [BR:
hoc00536
]
132825167
Cytokines and neuropeptides [BR:
hoc04052
]
Cytokines
Growth factors (RTK binding)
132825167
Glycosaminoglycan binding proteins [BR:
hoc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
132825167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
132825167
NCBI-ProteinID:
XP_060696174
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All DBs
Position
20:20500381..20537289
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AA seq
227 aa
AA seq
DB search
MRATVYFMLSFCYLTCTCTEEAEFPPELLEKLAHSDITSIRDLQRLLEIESVGDDDHTEA
NLRSHSINAVKHEYTKRSAPIRRRRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANFLIWP
ACVEVRRCTGCCNTGSVKCQPSRIHHRSVKVAKVEYIRRKPRLKEVIVRLEEHLECMCTL
LHSNSEHREHEGPFTSPKRFKGRNSEKIKKRKRKKLILAPDKDVFPT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacggtttatttcatgctcagcttttgttacctgacctgtacatgtacagag
gaagctgaatttccccccgaattgcttgagaaactggcacacagtgatattaccagcatc
cgcgatcttcagcgcctcctggagattgaatccgtaggggatgatgatcacacagaagct
aatttaaggtctcacagtattaatgcagtaaaacatgagtatacaaagcgttcagcacct
atacgcagaaggcgaagtattgaagaagctgttcctgcagtgtgtaaaacaaggactgtc
atttatgaaatacctcgcagtcagatagatcccacctctgccaacttcctgatatggcct
gcttgtgtggaggtcagacgctgcacaggctgctgcaacactggcagcgtcaaatgccag
ccctctcggatacatcatcgaagtgtcaaggttgcaaaagtggagtatataaggcgcaag
cccagattaaaggaggttatagtgaggttagaagagcacctggaatgtatgtgcacatta
ctacattctaattcagaacacagagaacatgaagggcctttcaccagcccaaagcgcttt
aaaggaagaaatagtgaaaaaattaaaaaacggaagcgtaaaaagttaatactggcacct
gacaaggatgtgtttccaacataa
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