Hemiscyllium ocellatum (epaulette shark): 132825871
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Entry
132825871 CDS
T09720
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132825871 (traf1)
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
ATG16
zf-C3HC4
DUF5798
zf-RING_UBOX
PMD1-like
TRAFD1-XIAF1_ZnF
zf_C2H2_13
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
132825871
NCBI-ProteinID:
XP_060697439
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Position
21:complement(51273062..51312939)
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AA seq
588 aa
AA seq
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MAQELNGFVCNGLPSSPDENELPSGFPQNICDDVPEEKYLCSFCKNILRKACQTLCGHRY
CWACVEWIVKYNKTPICQKCKEDEPPSINEDSILALGKIFTDAAVSKEILDLKVHCINLG
CTWKNILKNYEDHITQCEFSLIPCSTGCGSMILRRKLADHLEKECKNNMTECQQCGVKMF
LKDLQMHACEEAFANEKKTFKGESANKEKFRPPGGNRTRDSCRFAELGCNFKGGKERLKD
HENSSVVAHLASVFQFVNTLKTTFLQNSSIANGCSDHSSMISLSSMITELQFKIQQLDKD
VLSLSSSDSLASLHTQVAVESNGDLETDHFEGPSCSSEFSDLQTVSYPGQTLSECRNKVD
ALELKIQTFENIVTVLNREVEKTQATMAAFERQNKIDQDAIRALERKVSDQQHLLTLKDV
IINEFRLQILALEQTSYEGILMWKITDVNRKRQEAISGKVTNFSSPAFYTSKYGYKVCLR
IYLNGDGSGRGTHISLFFVVMRGEYDALLHWPFKQKVTFMLLDQNNREHLIDAFRPDVNS
SSFQRPVKEMNIASGCPMFIPLAKLDAPKQTYVKDDTLFIKCIIDAAT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagagctcaatggatttgtgtgcaatggtctgccttcttcacccgatgaaaac
gaattgccttctggctttccacaaaatatttgtgatgatgtacctgaggagaagtacctg
tgcagcttttgtaaaaatatcttgaggaaagcatgccaaacattgtgtggacatcgttac
tgctgggcatgtgtcgagtggattgtcaaatataataaaactccaatttgccaaaaatgt
aaggaagatgaacctccaagtataaatgaagatagcattttggccttgggaaagattttc
actgatgctgcagtatctaaggagattttagatttgaaagtacattgtatcaatcttgga
tgtacctggaaaaacatattgaagaactatgaggatcacataacacagtgcgaattttcc
ctgatcccttgtagtacaggttgtggatcaatgattttaaggaggaaactggcagatcat
ttggaaaaagagtgtaaaaacaatatgacagaatgtcaacagtgtggtgtaaagatgttt
ttgaaagatttgcagatgcatgcctgtgaggaagcttttgctaatgagaagaaaacattt
aaaggtgaatcagccaataaagaaaagtttcggcctcctggaggaaaccgtacccgtgac
agctgtcgttttgcagaattgggatgcaatttcaagggtggcaaagaacgtctcaaagat
cacgagaactcttcagttgttgcacatcttgcctcagtatttcaatttgtcaatactttg
aaaaccacctttctgcagaattccagcattgctaatggttgcagtgatcattcatcaatg
atttctctctcatcaatgattactgaattacagttcaaaatccagcagttagacaaggat
gtgctgtctttgtcctcctcagattctttagcctctttgcacacccaggttgccgtggaa
tctaatggtgacttagaaactgatcattttgaaggaccttcctgttctagtgagttttca
gacttgcagacagtcagttatcctggtcagactttgtcagagtgtcgaaataaagttgat
gctcttgaactgaaaattcagacatttgaaaatattgtgactgttttgaacagagaagta
gaaaaaacccaagctactatggctgcatttgagagacaaaacaagattgaccaggatgcc
atcagagccttggagcgaaaggtttccgatcaacagcatctccttactttgaaagacgtg
atcatcaatgaattccgtttgcaaatacttgccttggaacaaacttcttatgagggaata
ttgatgtggaaaattactgatgtcaatagaaaacgccaggaagccatttcaggcaaagta
acaaacttctcctctccagcattctacactagcaaatatgggtataaagtgtgtttaaga
atttatttaaatggagatggatcaggccgaggaacacacatctctttgttctttgttgta
atgaggggtgaatatgatgctttgcttcattggccgtttaaacaaaaggtcaccttcatg
cttctggaccagaacaacagggaacatttaatagatgcctttcgtccagatgttaattct
tcctcatttcaaagaccagtaaaggagatgaatattgcaagtggctgtccaatgtttatc
ccactggctaaacttgacgctcccaaacagacctatgtgaaggatgacaccttattcatt
aaatgtattatagatgctgctacgtaa
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