Hemiscyllium ocellatum (epaulette shark): 132826005
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Entry
132826005 CDS
T09720
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010
MAPK signaling pathway
hoc04137
Mitophagy - animal
hoc04141
Protein processing in endoplasmic reticulum
hoc04210
Apoptosis
hoc04217
Necroptosis
hoc04621
NOD-like receptor signaling pathway
hoc04622
RIG-I-like receptor signaling pathway
hoc04920
Adipocytokine signaling pathway
hoc05132
Salmonella infection
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132826005 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132826005 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132826005 (traf2b)
09143 Cell growth and death
04210 Apoptosis
132826005 (traf2b)
04217 Necroptosis
132826005 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132826005 (traf2b)
04622 RIG-I-like receptor signaling pathway
132826005 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
132826005 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132826005 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
132826005 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132826005 (traf2b)
04121 Ubiquitin system [BR:
hoc04121
]
132826005 (traf2b)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132826005 (traf2b)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132826005 (traf2b)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132826005 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-C3HC4_4
zf-C3HC4_5
zf-C3HC4_2
zf-RING_5
Ferritin_2
zf-RING_UBOX
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132826005
NCBI-ProteinID:
XP_060697695
LinkDB
All DBs
Position
21:complement(17640552..17700246)
Genome browser
AA seq
557 aa
AA seq
DB search
MAARCERSPPNSLESQAAGNLSGFPKELLATKVEGKYLCFECHGILRKPFQAQCGHRYCA
SCLKRIVSTGSQKCAACIQEDIYEEPLSVLDASSAFPDNAARREVENLPAVCNNESCTWK
GTVKEYEADHEGRCEYTLTPCEACSRMVRQLDMSRHLERECPERNLNCKFCKLLFHHKDI
KAHDEICSKFPLTCEWCGKKKIPREKYLDHTRTCGKVKFPCRFNVIGCEITAEKEKLAEH
ENQCVVDHMQMLLQHVMGIRSAVENLQPLHLQQAKLKVSQLFTSVREMEETLGPFRSIGL
GERGSSSPGGDLAKAYLSESLEDVQKRCAALKHKAETFENIVCVLNREVERASVSMVAYE
QQHKLDQEKIEALQAKVRQMEHATALKDLSIAELELKLQALEYSTDNGIFIWKISDFSRR
RQEAKTQRSPAIFSPAFYTSKYGYKMCLRVYLNGDGVGRGTHMSLFFVIMKGNYDSLLRW
PFKQKVTLLLLDQTNREHIIDAFRPDISSSSFQRPVTEMNIASGCPLFCPLSKLDSKNNY
SREDCIFIKAIVDLTDL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaggtgtgagaggagcccaccaaactcattagaatcccaagctgcgggaaat
ctgagtggttttccaaaagaacttttggcaacaaaagtcgaggggaagtacctgtgcttt
gagtgtcacggaattctcaggaaaccattccaggcacaatgcggtcaccgttactgcgca
tcctgcttgaagaggattgtcagtactggctcacaaaaatgtgcagcctgcatccaagaa
gacatttatgaagaaccgttgtctgttctggatgccagctcagctttccccgacaatgca
gctcgcagagaagtggaaaacctgcctgcagtttgtaacaatgagagctgtacctggaaa
ggcactgttaaggagtatgaggctgaccacgagggaagatgtgagtatacattaacacct
tgtgaagcgtgcagcaggatggtacgccaactcgacatgtcccgccacttggagcgagag
tgccccgaaaggaacctcaactgcaaattctgtaaattactgtttcaccacaaggacatt
aaggcccatgatgaaatctgttccaagtttccgttaacatgcgaatggtgcggaaagaaa
aaaattccaagagaaaagtacttggatcatactcggacatgtgggaaggtgaagttccct
tgccgctttaatgtgattggctgtgaaataactgctgagaaggaaaagctggctgagcat
gagaaccagtgtgtggtggaccacatgcagatgctgctccaacatgtgatgggaatacgg
agtgctgtggaaaacctacagcctctgcacctgcagcaggccaagctcaaggtcagccag
ctcttcacctccgttcgtgaaatggaggagactctgggaccgttccgatcgatcggcctt
ggtgagagaggctcctcctcccctggtggggacctggcgaaagcttacttgtcagaaagc
ttagaagatgtgcaaaagcgatgtgcagctctgaagcacaaagccgaaacattcgaaaac
attgtctgtgttcttaaccgtgaggtggagcgagcctccgtgagcatggttgcttacgaa
caacaacacaaactggaccaggagaagattgaagccttacaagcaaaggtgcgtcagatg
gaacacgctacagccttgaaagacctgtctatagcagagttggaactgaagctgcaggca
ctggagtacagtactgacaatggaatctttatctggaaaatatccgatttcagtcgaaga
cgacaggaagctaaaacccaacgatcgcctgctatattctcccccgctttctacaccagt
aaatacggctacaagatgtgcctgcgtgtctatctgaatggtgatggggtgggccgtgga
acccacatgtctctcttctttgttattatgaaaggaaactacgatagtttgctgaggtgg
cctttcaagcaaaaggtgactctgttgctgttggaccagactaaccgtgagcacatcatc
gatgcattcagaccggatatcagttcctcctcattccagagaccggtcaccgagatgaac
attgccagtgggtgcccacttttctgtccacttagtaaactggacagcaagaacaattac
tcacgtgaagactgcatttttatcaaagccatcgtggatttaactgacctgtaa
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integrated database retrieval system
