KEGG   Hemiscyllium ocellatum (epaulette shark): 132826545
Entry
132826545         CDS       T09720                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132826545 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hoc03041]
    132826545 (smndc1)
Spliceosome [BR:hoc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132826545 (smndc1)
 Complex B
    132826545 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    132826545 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 SGF29_Tudor HisKA_3
Other DBs
NCBI-GeneID: 132826545
NCBI-ProteinID: XP_060698503
LinkDB
Position
22:complement(60872105..60902216)
AA seq 238 aa
MSDELAKQLASYKAQLQQVEAALSTDAENEDLLKLQKDLQEVIELTRDLLSNQPSVAAAN
ADNSANSIPSHKWKTGDKCMAIWNEDGQLYEAEIEEIDQENGTAAITFSGYGNADVLPLV
NLKPVEEGNDSEELGGDKPKSKKEMVAQQREYKKKKALKKAQRMKELEQEREEQKVKWQQ
FNNRAYSKNKKGQVKKSIFASPESVTGKVGVGTCGIADRPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagatgaactggcaaagcagctggccagttataaggcacaacttcaacaagtagaa
gctgcattatctactgatgcagaaaatgaagatctccttaaattacaaaaggatttgcag
gaagttatagaactgaccagagacctgttatcaaatcagccttctgttgctgcagctaat
gcagataactcagcaaattccatacctagtcataaatggaagactggtgacaagtgtatg
gccatttggaatgaagatggacaactgtatgaagcggagattgaagagattgaccaagaa
aatggtacagctgcaatcacattttctggatacggtaatgctgatgtgcttcccttggtc
aacctgaaacctgttgaagaaggaaatgattctgaagagctgggcggtgacaaacccaaa
tcaaagaaggaaatggttgctcaacagagggagtataagaagaagaaagccttaaaaaaa
gctcagagaatgaaggagcttgaacaggagcgtgaggaacaaaaagtaaaatggcagcag
tttaacaacagagcctactccaagaacaaaaaaggacaggtgaagaaaagcatttttgcc
tcacctgaaagtgtgaccggaaaggttggagttggcacatgtggaatagcagacagaccg
atgactcaataccaagacacatccaaatacaacgtgcggcatcttatgccacagtag

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