Hemiscyllium ocellatum (epaulette shark): 132828037
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Entry
132828037 CDS
T09720
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc00514
Other types of O-glycan biosynthesis
hoc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132828037 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132828037 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hoc01003
]
132828037 (rfng)
Enzymes [BR:
hoc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
132828037 (rfng)
Glycosyltransferases [BR:
hoc01003
]
Glycan extension
O-Glycan
132828037 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Lectin_N
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
132828037
NCBI-ProteinID:
XP_060700930
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All DBs
Position
25:complement(26513654..26567012)
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AA seq
412 aa
AA seq
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MRLRWSANSKLCFLLSLTLCASLLLLMGLQQWGPSDLQLSRSLQPFRQTLGNATVDRSLF
KQEKRSRAASAGSSIADSSSAFKREDSRHQVAKSDKVLRTYPKAKGLQDFAKNSTVKDQR
GPGAWEKAAALPWDIAPHSKHNMQLSDIFIAVKTTRKYHKARLDLLYQTWISLVKEQTFI
FTDGEDKELQAKAGDRMINTNCSAAHTRQALCCKMSVEYDKFIESKKKWFCHVDDDNYVN
IRSLVYLLSAYSHTQDVYIGRPSLDHPVEAAERVKSDGSTTVKFWFATGGAGFCISRGLA
LKMSPWASFGNFISTAEKIRLPDDCTIGYIIEGLLEVKMIHSDLFHSHLENLQQIPPTII
PRQVTLSYGSLEMKRNVLRVQGPFSLADDPSRFKSIHCLLYHDAWCPVKDRY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttacgatggagtgcaaacagtaaactctgtttcctgctctccctgactctctgc
gcctctcttctgctcctgatgggactccagcagtggggaccctcggatctgcagctctct
cgatccctgcagcccttcagacagacccttggaaatgcaaccgtggacagaagcctcttt
aaacaggagaaacgaagcagagccgcttcagcggggagctccatcgctgactccagcagc
gcatttaaaagagaggacagccgccaccaagttgcaaaatcggacaaagttctccggact
taccccaaagcgaaagggctgcaggattttgcgaagaactcgacagtgaaagatcagcga
ggtcccggagcctgggagaaagctgcagcgctcccgtgggacatcgcaccgcacagcaag
cacaacatgcaactcagtgacatttttattgcggtaaaaactactcggaagtatcacaaa
gcccgattggatctgctttatcagacctggatctcactagtaaaggaacagacattcata
ttcacagatggagaggacaaagagttgcaagcaaaggctggagatcgcatgattaatacc
aattgttctgctgcacatacacgtcaagcgctttgttgtaagatgtctgtggagtatgac
aaattcattgaatccaaaaaaaagtggttttgccatgttgacgatgataattatgtaaat
attcgcagtttagtctacttattatcagcatactcgcacactcaagatgtttatattggt
agaccaagtcttgatcatccagtggaggctgcagagcgggtgaagagtgatgggtcgaca
acagtgaagttctggtttgccacaggaggagctgggttctgtatcagccgtggattggcg
ctaaagatgagtccatgggccagttttggaaactttattagcacggcagagaagatccgc
cttcctgatgattgtacaattggctatatcatcgaaggtctactagaagtgaagatgatt
cacagtgatctgttccactcgcacctagagaacctgcagcaaatcccaccaactattatc
cccagacaggtcaccttaagttatggaagtttagaaatgaagcggaatgtactgagagtc
caagggcctttcagtttggcagatgatccttcaaggttcaagtctatacattgtctcctc
taccacgatgcctggtgtcctgtcaaagacaggtactga
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