Hemiscyllium ocellatum (epaulette shark): 132828971
Help
Entry
132828971 CDS
T09720
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132828971 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132828971 (c9orf72)
Membrane trafficking [BR:
hoc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
132828971 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
132828971
NCBI-ProteinID:
XP_060702196
LinkDB
All DBs
Position
2:125727520..125767232
Genome browser
AA seq
461 aa
AA seq
DB search
MSSACPPQSPAVAKTEIPLDSGSPLLAATFAYWDNILGPRVRHIWAPKSEQLLLSDGEIT
FLANHTLNGEILRSAKSGAIDVKFFVLSEKGVIIISLIFDGNMNGDRSTYALSVILPQTE
LSFYLPLHRLCVDRLTHIIRKGRIWMYKGQSIISFLTTEITPVMELFSSMKTYGVLEEVQ
IKDTLLNDDDIGDSCREDFLHKAISSHLQTCGCSVVIGSNPEKVNKMVRTLCLFLTPNER
KCARLANASGSFKYDSGLFVQGLLKDATGSFVLPFRQIMYAPYPTTHIDVDVNTVKQMAP
CHEHIYNQQSYMSQELHKLQKTASEEDVIPDTVIHMDESFTPDLNIFQDMMYRDTLVKSF
LDQIFQLKSGLSLRSIFLSQFLLVLHRKAQTVIKYIEDETQKGKKPFKSLRNLKTDLDLA
VEGDLAIIMAIAEKLKPGLHSFIFGKSFYTSVQERDVLMSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctgtccacctcagtcaccagctgttgcaaaaacagagattcccttggac
agtgggtcacctttgttggctgctacttttgcgtactgggacaacattcttggcccgaga
gtgagacatatctgggctccaaaaagtgaacagctgctgctaagtgatggcgaaataaca
tttttggcaaaccacaccttaaatggtgagattcttcggagtgccaaaagtggagctatc
gatgtcaagttttttgtactgtcagagaaaggggtaatcatcatctcattgatatttgat
ggcaatatgaatggtgaccgtagtacttatgctctgtcagtaatattgccacaaactgaa
ctaagtttctacctacctctgcatagattgtgtgtggacagactaacacacattattaga
aaaggaagaatatggatgtataagggacaaagcattatatctttcttaacaacagagatc
acacctgtcatggaattattttcatccatgaaaacatatggcgttctagaagaagttcaa
atcaaggatacccttttgaatgatgatgatattggtgacagctgccgtgaagattttctg
cacaaggccattagctctcacttgcagacatgtgggtgttcggttgtcataggaagcaat
ccagaaaaagtgaataagatggttcgaacattgtgccttttcttaactccaaatgaacga
aaatgcgcacgacttgctaatgctagtggttctttcaaatatgattcaggtctttttgtt
cagggccttttaaaggatgctaccggtagctttgtgctgcctttccgtcaaattatgtat
gctccatacccaaccacacacattgatgttgatgtgaatacagtcaagcagatggcccca
tgccatgaacacatttataaccagcagagttacatgagccaggaacttcacaaacttcaa
aagactgcatcagaagaagatgtgatccctgatactgtaattcatatggatgagagtttc
actcctgatctgaatattttccaggacatgatgtatcgggatacattggtaaagtcattt
ttagatcagatttttcagctcaaatctggcttgtccctcagaagcatttttctgtcacag
tttctccttgtacttcacagaaaagctcaaacagtgataaaatacatagaggatgaaacc
cagaagggaaagaagccatttaaatccttgcgcaatctgaaaactgaccttgatcttgca
gtggaaggtgacttggctattatcatggctatagctgagaaattaaaaccaggcttacat
tcatttatttttggaaaatcattctacaccagtgtacaagaacgtgatgtattaatgtca
ctttag
DBGET
integrated database retrieval system
