Hemiscyllium ocellatum (epaulette shark): 132830940
Help
Entry
132830940 CDS
T09720
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132830940 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132830940 (eftud2)
Spliceosome [BR:
hoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132830940 (eftud2)
Complex C
U5 SnRNP specific factors
132830940 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132830940
NCBI-ProteinID:
XP_060704886
LinkDB
All DBs
Position
32:complement(21158223..21253844)
Genome browser
AA seq
968 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEEDGIVRDDDVDEDDDDEEEAGDQDDDNVGMEVVLHEDKK
YYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKKKKFTLMEQELPETVYDMEFLADLMD
NSELIRNITLCGHLHHGKTNFVDCLIEQTHPEIRKKDDRDLRYTDILFTEQERGVGIKST
PVTMVLPDSKGKSYLFNIIDTPGHVNFSDEVTAGFRISDGMVLFIDAAEGVMLNTERLIK
HAVQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSVYSTDENLIVSPLL
GNVCFASSQYSICFTLGSFAKIYADTYGDINYMEFAKRLWGDIYFNPKTRKFTKKAPTSN
SQRSFVEFILEPVYKILSQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFF
GDFTGLVDMCVQHIPSPQSGARNKIEHTYTGSLDLDLGETMLECDPDGPLMCHTTKMYST
EDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRV
PAGNWVLIEGVDQPIVKTATITEPRGNDEAQIFRPLKFNTASVIKIAVEPVNPSELPKML
DGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCE
TVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDW
DLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGYVKDSIVQGFQWGTREGPLCDEPI
RNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVS
AVYTVLARRRGHVTQDAPIPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQAFSLSVFHHW
QIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQ
DVVLNYPL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggatacggacttgtatgatgaatttggtaactacattggaccagaattggactctgat
gaggaggatgggatagttagggatgatgatgtggatgaggacgacgacgatgaagaagaa
gctggagatcaggatgatgataatgttggaatggaagtggtgttgcatgaagataaaaag
tattaccctacagcagaagaggtgtatggacctgaggtagagacaattgttcaagaagag
gatactcaacctctcacagaaccaatcattaaacctgtcaagaaaaagaagtttacttta
atggagcaggagttaccagaaacagtatatgatatggagtttcttgcagatttaatggac
aattctgaacttattcggaacattactctctgtgggcatttgcatcatgggaagacaaat
tttgttgattgcttaattgaacagactcacccagagattcgtaaaaaggatgacagagat
cttcgctacactgatatacttttcacggagcaggagaggggagtaggtataaagagtaca
ccagtcacaatggtacttccagattctaagggcaaatcctacctcttcaacatcatagat
actccgggtcatgtaaacttctctgatgaggttacagccggtttccggatctctgatggc
atggtgcttttcatcgatgcagcagagggggtaatgctgaatacagagagattgattaaa
cacgcagtacaggaaaagctagctgtcactgtttgtatcaataaaatagacagactcatt
ctggagctaaagctgcctccgactgatgcatattacaaactacgtcacattgtggatgaa
gttaatggattgcttagtgtctattcaacagatgaaaacctgattgtttcccctctgttg
ggcaatgtttgctttgctagttctcaatacagtatttgcttcaccctgggatcctttgcc
aagatttatgctgatacatatggggatattaactatatggagtttgcaaagcgtctgtgg
ggtgacatttactttaacccaaaaacacggaagtttaccaagaaggcaccgaccagcaat
tctcagagaagttttgtggaattcattttggaacctgtttacaagattctttctcaggtt
gttggtgatgtagacaccactctgccacgcacattggatgagcttggtattcatttgaca
aaggaggaattaaagctcaacattaggccattgctgcggctcgtctgcaagaaatttttt
ggtgactttacagggttggtagatatgtgtgtgcaacacatcccatccccacagtccggt
gcaaggaataaaattgaacatacatatacaggtagcctggatttggatcttggcgaaact
atgcttgaatgtgatcctgatggccctctgatgtgccacaccactaagatgtacagcaca
gaggatggagtacaattccatgcatttggtagggtgttgagtggaaccattcatgctggg
cagccagtgaaagtactcggagagaactacacactggaggatgaagaagattcacaaatt
tgcacagttggtaggctgtggatttcggttgcaaggtatcatatagaggttaacagagtt
ccagctggtaactgggtgctcatagaaggagtagaccaacccattgtaaagacagcaacc
atcacagaaccaagaggcaatgacgaggctcagatcttcaggcctctcaaatttaataca
gcatctgttattaaaattgctgtggaaccagtcaacccatctgagcttccgaagatgttg
gatggtttaagaaaggttaacaaaagctacccatcactaactactaaggtggaagagtct
ggagagcatgtaatactggggactggagaactttatctggactgtgtaatgcatgacctt
aggaagatgtattctgaaattgatataaaggtggctgaccctgttgtaacattctgtgaa
actgttgtggaaacctcatctttgaaatgttttgcagagacacccaacaaaaagaataag
atcacaatgattgcagaacccctggagaaaggtttagcagaagatattgagaatgaagtt
gtccaaattacctggaacaggaaaaaactgggtgaatttttccagacaaagtatgattgg
gatttattggctgcccgttccatttgggcctttggacctgacacaacaggcccaaacatt
ttggttgatgatacattgccatcagaggtggataaagcacttttaggttatgtgaaagac
agcatcgtccagggattccagtggggaactcgagaaggaccactttgtgatgagccaata
cgcaatgtgaaattcaagatacttgatgcggtaatagctcaggagccattacacagaggt
ggaggacaaattattcctacagccagacgagtagtgtattcagctttcctaatggccaca
cctcgtctgatggaaccttattactttgtggaggtgcaggcaccagcagactgtgtttca
gcagtttatacagtcttggctagaaggagaggccatgtgacacaggatgcaccaatccca
ggttctccactttatacaatcaaagcatttgtaccagctattgattcatttggctttgag
acagacctgcggacacacacacaggggcaagctttctctctctcagtcttccaccattgg
cagattgtacctggtgatcccttggacaaaagtatcattatcagaccattggaaccacaa
cctgcacctcatctggccagagaattcatgatcaaaacaaggaggagaaagggcctcagt
gaagatgttagtatcagcaaatttttcgatgatcccatgttgctggaacttgcaaagcag
gatgtggttctcaattatcccttataa
DBGET
integrated database retrieval system
