KEGG   Hemiscyllium ocellatum (epaulette shark): 132832429
Entry
132832429         CDS       T09720                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010  MAPK signaling pathway
hoc04137  Mitophagy - animal
hoc04141  Protein processing in endoplasmic reticulum
hoc04210  Apoptosis
hoc04217  Necroptosis
hoc04621  NOD-like receptor signaling pathway
hoc04622  RIG-I-like receptor signaling pathway
hoc04920  Adipocytokine signaling pathway
hoc05132  Salmonella infection
hoc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132832429
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    132832429
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    132832429
  09143 Cell growth and death
   04210 Apoptosis
    132832429
   04217 Necroptosis
    132832429
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    132832429
   04622 RIG-I-like receptor signaling pathway
    132832429
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    132832429
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132832429
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    132832429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hoc03019]
    132832429
   04121 Ubiquitin system [BR:hoc04121]
    132832429
Enzymes [BR:hoc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132832429
Messenger RNA biogenesis [BR:hoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     132832429
Ubiquitin system [BR:hoc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    132832429
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-C3HC4_2 TRAF3_RING zf-C3HC4 zf-TRAF zf-C3HC4_3 zf-C3HC4_4 zf-RING_2 zf-RING_UBOX zf-RING_10 zf-RING_5 zf-RING_4 ATG16 Crescentin MbeB_N
Other DBs
NCBI-GeneID: 132832429
NCBI-ProteinID: XP_060706394
LinkDB
Position
35:complement(4026274..4041566)
AA seq 451 aa
MSLLFLKRADSFLRSWKGSLSMKEVGEDQKDWHHDVRADQGFDHKYYCGVCEHLMRDPVQ
TECGHRFCQECHWALLKESMPCPSCLQDNGMVENGSCATLEKCFRDRAIAKEILNLQVYC
HNESCEWSGPLRELEGKHGPSCERRLLRCPFSLVGCRETVSGADLHQHKLSCIQQHLDYM
LEAFRQGLAKQAPGSGASLAQPEGVLGDGDGDGEQLSRDTEEQHDLRVRVQTFENIVTVL
NREVANTSNTLIAQERKLKEQETVTAQLRNKIQQHEKSICLKDLVIADLQLRLDILEHTS
YDGTLVWAISDFTRKMQDAIDRKVPSIFSPPFFTAHCGYMLCLRLYLNGDGIGANTHLSL
FLVIMKGKYDAILEWPFSKKVTFRLLDQSARRQHMVTAFKPDISSASFQRPGQPMNIASG
CPEFLPLSQLHANWQGYVTDDVMFIKASVDS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagcttgctgtttctgaaacgcgcagacagtttcctgaggagctggaagggttctctg
tccatgaaggaagttggtgaagatcagaaggactggcaccatgatgtcagggccgaccag
ggattcgaccacaaatactactgcggggtgtgtgagcacctgatgagggaccctgttcaa
acagagtgcggccaccgtttctgccaggaatgtcactgggccctgctgaaagaatcgatg
ccttgcccatcgtgcttacaagataacggaatggttgagaacggttcatgtgccacgctg
gagaaatgtttcagggacagagccattgccaaggagatcctcaacctgcaggtctactgt
cacaacgaaagctgtgagtggagcggaccactccgggagctggagggtaagcacgggccg
agctgtgagcgcaggttgctgaggtgccccttcagcctcgtcggctgcagagagacggtt
tctggggctgacctacaccaacacaagctgagctgtattcagcagcacctggactacatg
cttgaggcctttcggcagggcctggcaaaacaggccccaggatcaggagccagccttgct
cagccggagggggtcctgggcgacggcgacggtgacggtgagcaactgtcgagggacacg
gaggaacagcatgatctgagggtgagggtgcagacctttgaaaacatcgtgacggtgctg
aatcgcgaagtggcaaacacgtctaataccctgatagcccaggagaggaagctaaaggag
caggagactgtgaccgcacagctcagaaacaagatccagcagcacgagaaatccatctgc
ctgaaggacctggtcatcgctgacctccaactgcgcctcgatatcctcgagcacacatcc
tacgacggcactttggtctgggccatctctgacttcacccgcaagatgcaagacgccatt
gacagaaaagtgccctccatcttctccccaccgttcttcacagctcactgcggatacatg
ctgtgtctgcgactctacctcaacggggacggaatcggggcaaacactcacctctcactc
ttcctggtcatcatgaagggaaagtacgacgccatcttggaatggcccttcagcaagaag
gtgaccttccgcctgttggatcagagtgccaggcgtcagcacatggtgactgccttcaaa
ccagacattagctctgcctccttccaaaggcccggccagcccatgaacatcgccagcggc
tgcccagagttcctgccccttagccagctccatgccaactggcagggttatgtcaccgat
gatgtcatgttcattaaggccagtgtggactcttag

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