Hemiscyllium ocellatum (epaulette shark): 132832429
Help
Entry
132832429 CDS
T09720
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010
MAPK signaling pathway
hoc04137
Mitophagy - animal
hoc04141
Protein processing in endoplasmic reticulum
hoc04210
Apoptosis
hoc04217
Necroptosis
hoc04621
NOD-like receptor signaling pathway
hoc04622
RIG-I-like receptor signaling pathway
hoc04920
Adipocytokine signaling pathway
hoc05132
Salmonella infection
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132832429
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132832429
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132832429
09143 Cell growth and death
04210 Apoptosis
132832429
04217 Necroptosis
132832429
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132832429
04622 RIG-I-like receptor signaling pathway
132832429
09152 Endocrine system
04920 Adipocytokine signaling pathway
132832429
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132832429
09171 Infectious disease: bacterial
05132 Salmonella infection
132832429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132832429
04121 Ubiquitin system [BR:
hoc04121
]
132832429
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132832429
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132832429
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132832429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-C3HC4_2
TRAF3_RING
zf-C3HC4
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-RING_4
ATG16
Crescentin
MbeB_N
Motif
Other DBs
NCBI-GeneID:
132832429
NCBI-ProteinID:
XP_060706394
LinkDB
All DBs
Position
35:complement(4026274..4041566)
Genome browser
AA seq
451 aa
AA seq
DB search
MSLLFLKRADSFLRSWKGSLSMKEVGEDQKDWHHDVRADQGFDHKYYCGVCEHLMRDPVQ
TECGHRFCQECHWALLKESMPCPSCLQDNGMVENGSCATLEKCFRDRAIAKEILNLQVYC
HNESCEWSGPLRELEGKHGPSCERRLLRCPFSLVGCRETVSGADLHQHKLSCIQQHLDYM
LEAFRQGLAKQAPGSGASLAQPEGVLGDGDGDGEQLSRDTEEQHDLRVRVQTFENIVTVL
NREVANTSNTLIAQERKLKEQETVTAQLRNKIQQHEKSICLKDLVIADLQLRLDILEHTS
YDGTLVWAISDFTRKMQDAIDRKVPSIFSPPFFTAHCGYMLCLRLYLNGDGIGANTHLSL
FLVIMKGKYDAILEWPFSKKVTFRLLDQSARRQHMVTAFKPDISSASFQRPGQPMNIASG
CPEFLPLSQLHANWQGYVTDDVMFIKASVDS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgtttctgaaacgcgcagacagtttcctgaggagctggaagggttctctg
tccatgaaggaagttggtgaagatcagaaggactggcaccatgatgtcagggccgaccag
ggattcgaccacaaatactactgcggggtgtgtgagcacctgatgagggaccctgttcaa
acagagtgcggccaccgtttctgccaggaatgtcactgggccctgctgaaagaatcgatg
ccttgcccatcgtgcttacaagataacggaatggttgagaacggttcatgtgccacgctg
gagaaatgtttcagggacagagccattgccaaggagatcctcaacctgcaggtctactgt
cacaacgaaagctgtgagtggagcggaccactccgggagctggagggtaagcacgggccg
agctgtgagcgcaggttgctgaggtgccccttcagcctcgtcggctgcagagagacggtt
tctggggctgacctacaccaacacaagctgagctgtattcagcagcacctggactacatg
cttgaggcctttcggcagggcctggcaaaacaggccccaggatcaggagccagccttgct
cagccggagggggtcctgggcgacggcgacggtgacggtgagcaactgtcgagggacacg
gaggaacagcatgatctgagggtgagggtgcagacctttgaaaacatcgtgacggtgctg
aatcgcgaagtggcaaacacgtctaataccctgatagcccaggagaggaagctaaaggag
caggagactgtgaccgcacagctcagaaacaagatccagcagcacgagaaatccatctgc
ctgaaggacctggtcatcgctgacctccaactgcgcctcgatatcctcgagcacacatcc
tacgacggcactttggtctgggccatctctgacttcacccgcaagatgcaagacgccatt
gacagaaaagtgccctccatcttctccccaccgttcttcacagctcactgcggatacatg
ctgtgtctgcgactctacctcaacggggacggaatcggggcaaacactcacctctcactc
ttcctggtcatcatgaagggaaagtacgacgccatcttggaatggcccttcagcaagaag
gtgaccttccgcctgttggatcagagtgccaggcgtcagcacatggtgactgccttcaaa
ccagacattagctctgcctccttccaaaggcccggccagcccatgaacatcgccagcggc
tgcccagagttcctgccccttagccagctccatgccaactggcagggttatgtcaccgat
gatgtcatgttcattaaggccagtgtggactcttag
DBGET
integrated database retrieval system