Hemiscyllium ocellatum (epaulette shark): 132832854
Help
Entry
132832854 CDS
T09720
Symbol
tap1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
hoc04145
Phagosome
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132832854 (tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132832854 (tap1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132832854 (tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132832854 (tap1)
Enzymes [BR:
hoc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
132832854 (tap1)
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
132832854 (tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
132832854
NCBI-ProteinID:
XP_060707024
LinkDB
All DBs
Position
35:45715095..45756382
Genome browser
AA seq
731 aa
AA seq
DB search
MTLCVPLLCVPLLDVIATWTLNLALCHWGLAEPVLALWLLSLLRVGLLTVMLQACSLSQS
ELPAWLQPQELSWILLVSSLLTPAYVSLSAAAGLPSAEMLYGLHNWSALALNYASTGLVF
LLRWHFFPPSSDGQPVGEAGSKATLSRLLACMKPNIGHFLLVALFLVLSSLGEMAIPYYT
GRMTDWVMNEDDPSAFTNSIIAMSLITSASALTEFICDCVYNVTMTRIHTRIQSSVFRSV
VKQKICFFDTEHTGDITSRITTDTNTMSESLTEKLSLLMWYLMRAFFLLIFMVKLSFKLT
LFSIIGMFIISIVPKYTGKYYQKLAVDVQESLAKANDVAMETFSSMKTVRSFANEDGESR
RYSDRLEDTYRLNKKEAAAYAGFMWTNSLSDLALKVTLLYIGGCLVSGGSVSSGTLVSMI
FYQLQFTTAIEVLISVYPNVKKAVGASEKVFEYIDQPPDPATLGTLAPQSLRAHVEFRNV
TFSYPKRPNTPVLKNVSFELKCGEITALVGPSGGGKTTCVNLLERFYQPQSGQILLDGRP
IEEYEHKYYHSKVALVSQEPVLFARSVERNIAYGLDQQPLPSTLEEAATRADAHHFITTL
QEQYKTDVGEKGKQLSGGQKQRVAIARALIRHPLVVILDDATSCLDGISENTVLQSVYNG
NRQRAVLVIAHRLSTIERADHIVVLEAGTVVEEGTHQELRENGGCYQRLLQKHFQGFGKI
TEEEEPELLEN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctgtgttcctttgctctgcgttcccctgctggatgtcattgctacctggact
ctgaacctggctctgtgtcactggggcctggctgagccagtgctggctctctggctgctc
tcgctgctgcgtgtgggtctgctgactgtcatgctgcaggcctgctcgctttcccagtcc
gagctgccggcctggctgcagccccaggagctctcctggatactgctcgtttccagcctg
ctcactccggcctacgtcagcctgtcagccgccgccggcctcccctccgctgagatgctg
tacgggctgcacaactggagcgccctggccctcaactatgccagcacgggcctggtcttc
ctcctgcgctggcacttctttccccctagctccgacgggcagcccgtgggcgaggccggc
tccaaggccaccctgtctcgactgctggcctgtatgaaacccaacatcggccacttcctc
ctagtggctctgttcctggtcctgtcttcactgggggagatggcgataccctattacact
ggccggatgaccgactgggtgatgaacgaggacgacccatcagcgttcaccaactctatc
atcgcaatgtccctgatcaccagcgcaagtgctctgacagagtttatctgtgactgtgtc
tacaatgttacaatgacgcgtatccacacacgtatccagagctccgtgtttcgatcagtg
gtcaagcagaagatttgtttctttgacacagagcacacaggtgacatcacatcccggatc
accacggatacgaacactatgagtgagtcactgaccgagaaattgagcctgttgatgtgg
tacctgatgcgggccttctttctcctgatctttatggtcaagctgtcctttaaactgacc
ttgttcagcatcataggcatgttcatcatcagtatcgtcccgaagtacaccggcaaatac
taccagaaactggcagtcgatgttcaggaatccctggccaaggcgaacgacgtggcgatg
gaaaccttctcctcaatgaagactgtgcggagctttgccaatgaggatggcgagtctcgt
cgctatagtgaccggctggaggacacataccgcctcaacaagaaggaggcagcagcctac
gctggcttcatgtggaccaacagcctgtcagacctggcgttgaaggtcaccctgctctac
atcggaggttgcctggtctcaggaggcagtgtttcgagtgggactctcgtctccatgatc
ttctaccagctacagttcaccactgccatcgaggtgctgatctctgtctatcccaatgtg
aagaaagctgttggggcatcagagaaggtgtttgagtacatagaccagccgcctgatccc
gctacactgggcaccttggcaccacagtcactccgggcacacgtcgagttccggaatgta
accttctcgtacccgaaacgaccaaacacacccgtgttgaagaacgtctcctttgagctg
aagtgtggtgagatcacggccctggtgggaccctccggagggggtaagacgacgtgtgtg
aacctgctggagaggttttatcaacctcagtccggacagatcctgctggatggcagaccc
attgaggaatatgaacataaatattaccacagcaaggtggcactggtgagtcaggagccg
gtgcttttcgctcgctcagtggagaggaacattgcgtatggcctggaccagcagccactg
ccatctacattggaggaggcagctacccgcgctgatgctcaccacttcatcaccacactg
caggagcaatacaagactgatgtcggtgagaagggcaaacagctctccgggggtcagaag
cagcgagtggccattgcccgagctctgatccgacacccccttgtcgtgattctcgatgat
gctaccagctgcctggacggaatcagtgagaacacggtgctacagtctgtgtacaatggt
aaccggcagcgtgcagtgttagtcattgctcaccgtctcagtaccatcgagagggctgac
cacattgtggtgttggaggctggcaccgtggtggaggaaggcacacatcaggagctgcgg
gaaaacggcggctgttaccagcggctgctccagaaacacttccagggctttggaaagatt
acggaagaggaagagcctgagctattggagaactga
DBGET
integrated database retrieval system
