KEGG   Hemiscyllium ocellatum (epaulette shark): 132832937
Entry
132832937         CDS       T09720                                 
Name
(RefSeq) lymphotoxin-alpha-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04010  MAPK signaling pathway
hoc04060  Cytokine-cytokine receptor interaction
hoc04150  mTOR signaling pathway
hoc04210  Apoptosis
hoc04217  Necroptosis
hoc04350  TGF-beta signaling pathway
hoc04620  Toll-like receptor signaling pathway
hoc04621  NOD-like receptor signaling pathway
hoc04622  RIG-I-like receptor signaling pathway
hoc04625  C-type lectin receptor signaling pathway
hoc04920  Adipocytokine signaling pathway
hoc05132  Salmonella infection
hoc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    132832937
   04350 TGF-beta signaling pathway
    132832937
   04150 mTOR signaling pathway
    132832937
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    132832937
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    132832937
   04217 Necroptosis
    132832937
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    132832937
   04621 NOD-like receptor signaling pathway
    132832937
   04622 RIG-I-like receptor signaling pathway
    132832937
   04625 C-type lectin receptor signaling pathway
    132832937
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    132832937
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132832937
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    132832937
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:hoc04052]
    132832937
   00536 Glycosaminoglycan binding proteins [BR:hoc00536]
    132832937
Cytokines and neuropeptides [BR:hoc04052]
 Cytokines
  Tumor necrosis fators
   132832937
Glycosaminoglycan binding proteins [BR:hoc00536]
 Heparan sulfate / Heparin
  Cytokines
   132832937
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 132832937
NCBI-ProteinID: XP_060707163
LinkDB
Position
35:7189721..7211408
AA seq 209 aa
MYQNGERNSLAHREGVNQDCKTDSGNNKPERLPNDTGLETNPSPPPSSRSSIKDQTGCEG
RKCNVSLPIAHIVGKAGRSGLVWDDSSLESTRVKMGFENDAIVIEESGFYYVYSQVAFVG
TNCSKESLVLENRLLYKLPNYDQEHPQELLEVTESVCEGNTHLVKWQRSLRQGGVFNLKA
QTLLSVKIIPRDKAEMEHHKTYFGAFKLQ
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtaccaaaatggggagagaaactcactggctcacagggaaggagtgaaccaggactgt
aagactgattcaggaaacaacaagcctgaacggctacccaacgacacgggcctggagaca
aacccctcccctccacccagcagtaggtcttccattaaggatcaaactggatgtgagggg
cggaaatgcaatgtatcactgccaattgcacacatcgtagggaaggctggtcgatctgga
ttggtttgggatgactcctcactcgagtccacccgggtgaagatgggattcgagaacgat
gcgattgttatcgaggagtcgggtttttactacgtttattcccaggtggcgtttgtcggc
acgaactgcagtaaagaatccctggtcctggagaacaggctgctctacaaactacccaac
tacgaccaggagcacccacaggaactgctggaggtcaccgagtcggtgtgtgaggggaac
actcacctggtgaaatggcagcggtccctccgccagggaggggtcttcaatctcaaggcg
cagaccctcctctcggtcaagatcattcccagggacaaggccgagatggagcatcacaag
acttacttcggagcctttaaactgcagtga

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