Hemiscyllium ocellatum (epaulette shark): 132834014
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Entry
132834014 CDS
T09720
Name
(RefSeq) nectin-1-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03266
Virion - Herpesvirus
hoc04514
Cell adhesion molecule (CAM) interaction
hoc04517
IgSF CAM signaling
hoc04520
Adherens junction
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
132834014
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132834014
04517 IgSF CAM signaling
132834014
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132834014
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132834014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132834014
04090 CD molecules [BR:
hoc04090
]
132834014
Cell adhesion molecules [BR:
hoc04515
]
Immunoglobulin superfamily
Nectin family
132834014
CD molecules [BR:
hoc04090
]
Proteins
132834014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
Ig_2
ig
I-set
Ig_PVRIG
C1-set
C2-set_3
V-set_CD47
TM_ErbB1
Yip1
Syndecan
MtrF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
132834014
NCBI-ProteinID:
XP_060708709
LinkDB
All DBs
Position
38:35131472..35207929
Genome browser
AA seq
483 aa
AA seq
DB search
MATLYLIPFVLLLQTWSVCDAQNVKVEPFIYGYVGNQAVLRCQFVDPDNSLQVTQITWMK
NPTTTKVNLAVYNPDFGVNYPTDTGGRIHFRQVTNMDATLIIDRLEMEDDGIYSCEFATY
PDGNQDATTNLTILAKPENSGKTILVQAGHAEVPVARCVSANGKPPATISWSGGSEGNVS
ETITKNSDGTFTVTSEYLMIPTGDNNGEKLTCVVMQQALDRPVTIPIELSVQYAPIVSIE
GYDENWYLNREHASLTCSAKANPQALTYKWLLNGEPLPSSIHVDGHQLTVQDVSYVVNGT
FTCEVTNTMGTGRAKMDVVVREKRLPQASNVGAIVGGVIGGILALLLIAGLVAYFLHKRQ
RGAAGSYETKKRVFGTGNGAPQPEYTYRPDSDSERVPSGTVTTSSTVVGHHTGEAEKLLT
SEAPDYENFKSSQEEEDNDDEELGSSKGPALSLPGHPRDEIQMEDDMESQRDGSIISKRA
VYV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacgttgtatctgattcccttcgtcttgttacttcaaacctggagtgtttgtgat
gcccagaacgtgaaagtggaacccttcatttacggctacgtggggaaccaggcagtcctg
cggtgccagtttgtggatcctgacaactcgctccaggtcacacaaatcacctggatgaag
aaccccaccaccactaaggtcaacctggccgtgtacaaccccgactttggcgtcaactat
ccgaccgacaccggcggccgcatccactttcgccaggtcaccaacatggacgccacgctg
atcatcgatcgcctggagatggaagatgatgggatttacagctgcgagtttgctacttac
cctgatggcaaccaggatgctaccaccaacttgacaattctagccaagccagagaattcc
ggcaaaacgatccttgtccaggctggacacgctgaagtccccgtcgccaggtgtgtctcg
gcaaacgggaagcctccagccaccatcagctggtcggggggctctgagggcaacgtttct
gagactattaccaaaaacagcgacggcactttcacggtgacgagcgaatacttgatgatt
cccaccggtgacaacaacggggagaagctgacctgtgtggtaatgcaacaggcactcgat
cggccggtgaccattcccatcgaactctctgtacagtatgcacctatcgtgagcattgag
gggtacgatgaaaactggtacctgaaccgggagcatgcttcattgacctgtagtgcaaaa
gccaatccccaagctttgacttacaaatggctcctgaacggggagccccttccttcctcc
atccacgtggatggacaccagctcactgtacaggatgtgagttacgttgtcaatggcacc
ttcacctgcgaagtcaccaacaccatgggcacaggtcgggcgaagatggacgttgtggtt
cgtgagaaacggttgccgcaggcgagcaacgtgggagcgattgtgggcggcgtgattggt
gggatcttggcactcttgctcatcgccggcctggttgcctactttctgcacaaacgccag
cgcggggcagccggctcctatgagaccaagaagcgggtctttggcaccgggaatggcgca
ccccagcccgagtacacgtaccggccggactccgactccgagagggtgcccagcggcacc
gtgaccaccagctccacagtggtgggccaccacactggtgaggcggagaagctgctgacc
agtgaagcacctgattatgagaacttcaagagcagccaggaggaggaggacaacgacgac
gaggaactgggcagctccaagggtcccgctctgtccctcccaggccaccctcgggatgag
atacaaatggaggacgatatggaatctcaacgagatggctccatcatctccaagagggca
gtctatgtctga
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