Hemiscyllium ocellatum (epaulette shark): 132836696
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Entry
132836696 CDS
T09720
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04620
Toll-like receptor signaling pathway
hoc04621
NOD-like receptor signaling pathway
hoc04622
RIG-I-like receptor signaling pathway
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132836696
04621 NOD-like receptor signaling pathway
132836696
04622 RIG-I-like receptor signaling pathway
132836696
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132836696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
ATG16
zf-RING_5
CEP104_ZnF
CCDC170_2nd
zf-RING_2
NOCA1_mid
zf-RING_UBOX
zf-C3HC4_4
XLF_CC
DM
CCDC39
Sina_ZnF
FapA
DUF6158
TPLATE_Ig
Motif
Other DBs
NCBI-GeneID:
132836696
NCBI-ProteinID:
XP_060712081
LinkDB
All DBs
Position
47:complement(7975765..8036852)
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AA seq
575 aa
AA seq
DB search
MAAGSGSDRSKPCLYRPVKEAPTSASCRPHQIPGAELPEGGYSEEFVQAVDSKYRCEHCQ
RVLRNAKQTECGHRFCESCLSALLRIPGQVCPADQQLLDNTEVFNDNCCRKEILKLLIHC
RNRKAGCQQQMALGSLEAHLNSCPFQTIQCSRCPEMVQRQELSDHLMFKCKHQAVQCRHC
QEEMTVAELKAHEESECLSSLAASSKPCGARGHRTELKGAMSEYLKAEGGCKFSSYGCTF
KGPSQKAKEHETQSVEQHLLLVLLRNKALEEKVSELKSEIKEKHSVLQKLAGQIPKMEKE
MSLTNQSVNRSEIKLNQSQKTLAVHTDRLHQVEQELLERRKLQENLKQELLSVRYNTGNL
SSRLSFLETGQSSPCLYRGVSNSELVEQQVTQHDNLLSVHEVRLAEIDLRFQLLETASYN
GRLIWKIRDYAQRKQEAVSGKTLSLYSQPFYSSSFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDPLLPWPFKQKVTLTLLDQGLAKAHVSDTFKPDPNSSSFRRPQSEMNVASGCP
LFVTQTVLENEMHHYIKDDTIFIKVTVDVSDFLEL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggaagtggttcagacaggtcaaagccgtgcttgtaccgacctgtgaaggag
gctcccaccagcgcctcgtgtaggcctcaccagatcccgggagccgagctccctgaaggg
ggctactctgaagagtttgttcaggccgtcgacagcaagtacagatgtgagcattgccag
cgggtgctgcgcaatgccaagcagactgagtgtgggcaccgcttctgtgaaagctgcctc
agcgcccttctcaggattcccggtcaggtttgcccagctgatcaacagcttctggacaac
acggaggtgttcaacgataattgctgccggaaggagatcttgaagttgctgattcactgc
aggaacaggaaggcaggttgtcaacagcaaatggccctgggatctttggaggctcatttg
aacagctgtccctttcagacaatccaatgctcacgttgtcctgagatggtgcaacggcaa
gagctgagtgaccacctaatgttcaagtgcaaacaccaagcagtgcagtgtagacactgt
caggaggagatgacagtcgctgaactaaaggcacatgaagagagtgagtgcctctcttct
ctggccgcttcttcaaaaccctgtggggcgcgtggtcacaggactgagctcaaaggtgcc
atgtcagagtatctcaaggctgaggggggttgcaagtttagcagctacgggtgtacgttt
aagggaccaagtcaaaaggccaaagaacacgaaacacagtcggtggagcagcacctgctg
ctggtgctgctaagaaacaaggcgctggaggagaaggtctccgaactcaagagtgagatc
aaagagaaacacagtgtcttacaaaagctggccggtcagattccgaaaatggagaaggaa
atgtctttgacgaaccaatcggtgaacagaagtgagatcaaattgaaccaatcgcagaaa
acattggctgtgcacactgacaggctgcatcaggttgagcaggagctactggagaggcgc
aaattacaggaaaacttaaaacaagaactcctgtcagtccgttataacacgggaaacctg
tccagtcggctatcattcctagagactggccaaagctccccctgcctctacagaggtgtc
agtaactcagagttggtcgaacagcaagttacccaacacgataacctgttgagtgtccac
gaggtgcgacttgctgagattgatctccgctttcagctgctggagacggccagttataac
gggcgcctgatctggaaaatccgggactatgcccagcggaagcaggaggcggtatctggg
aagaccctgtccctgtacagccagccgttctacagcagctccttcggctacaagatgtgt
gccagggtctacctgaacggcgatggcatgggcaagggcacccacctgtcgctgttcttc
gtggtgatgcgcggtgagtacgaccccctgctgccctggcccttcaagcagaaggtgacc
ctcactctcctggaccagggcctggctaaggcccacgtgtcagataccttcaaacccgac
cccaacagctccagcttccgcaggcctcagagtgagatgaacgtggcgtccggctgcccg
ctgtttgtgactcagaccgtgctcgagaacgagatgcaccactacatcaaggacgacacc
atcttcatcaaggtgaccgtggacgtgtcggatttcctggagctctga
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