Haliangium ochraceum: Hoch_2360
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Entry
Hoch_2360 CDS
T01103
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hoh
Haliangium ochraceum
Pathway
hoh01501
beta-Lactam resistance
hoh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hoch_2360
01503 Cationic antimicrobial peptide (CAMP) resistance
Hoch_2360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoh03036
]
Hoch_2360
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoh02000
]
Hoch_2360
01504 Antimicrobial resistance genes [BR:
hoh01504
]
Hoch_2360
Chromosome and associated proteins [BR:
hoh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Hoch_2360
Transporters [BR:
hoh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Hoch_2360
Antimicrobial resistance genes [BR:
hoh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hoch_2360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
OEP
Biotin_lipoyl
CusB_dom_1
Biotin_lipoyl_2
HlyD_2
UvsW-1
Motif
Other DBs
NCBI-ProteinID:
ACY14898
UniProt:
D0LJ51
LinkDB
All DBs
Position
complement(3271971..3273113)
Genome browser
AA seq
380 aa
AA seq
DB search
MGLGWAVVARLGDSDDARARAGRAGPAAVEVAPIEHGSIAWRRSFSGTLEARAQFVVAAH
VSGRVGRLLVDLADPVERGQVVAELDDDERVEGVSQAAAELAVADARSGEAQEALTIAER
EFDRMRGMGERGLISESEVDSARAEYLQQQASVTVAQAEVKRATAALRLARVRSGYTSIA
ANWSGDDAQRVVAQRHVDEGDMVAANAPLFTIVALSPITAVVHVTEKEYAHLAPGQPVSV
STDAYPGRSFAGEIRRIAPVFRESSRQARVELELPNQDGALKPGMFVRADIELERVEDTT
LVPEIALVTRDGKTGVFLVEPSGTEVSWRVVETGIRDGDRVEVRDALSGRVVTLGQQLID
DGSAIDIVAEEKEAQPGEDT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgggcctgggctgggccgtcgtggcccggctcggggacagcgacgatgcccgcgcccgc
gccggtcgcgcaggtcccgcggcggtcgaagtggccccgatcgagcacggcagcatcgcc
tggcgacgcagcttcagcggcaccctggaggcgcgcgcgcagttcgtggtcgccgcgcat
gtcagcggccgcgtgggacgcctgctcgtcgatctcgcggacccggtcgagcgcggccag
gtggtcgccgagctcgacgacgacgagcgcgtcgagggcgtcagccaggccgcggccgag
ctggcggtggccgacgcgcgttcgggcgaagcccaggaggcgctcaccatcgccgagcgc
gaattcgatcgcatgcgcggcatgggcgagcgcggcctcatctccgagtccgaggtcgac
agcgcccgcgccgagtacctgcagcagcaggcgagcgtaaccgtggcccaggccgaggtc
aagcgcgccaccgcggccctgcgcctggcccgggtgcgctcgggctacaccagcatcgcg
gccaactggagcggcgacgacgcccagcgcgtggtcgcccagcgccacgtcgacgagggc
gacatggtcgcggccaacgcgccgctgttcaccatcgtggcgctgtcgccgatcacggca
gtcgtccacgtgaccgaaaaagaatacgcgcacctggcgcccgggcagccggtgagcgtg
agcaccgacgcctatcccgggcgcagcttcgccggcgagatccgccgcatcgcgccggta
ttccgcgagagctcgcggcaggcgcgggtcgagctcgagctgcccaaccaggacggcgcg
ctcaagccgggcatgttcgtgcgcgccgacatcgagctcgagcgggtcgaggacaccacc
ctggtgcccgagatcgccctggtcacccgcgacggcaagaccggcgtctttctggtcgag
ccgagcggcaccgaggtgagctggcgcgtggtcgagaccggcatccgcgacggcgaccgg
gtcgaggtgcgcgacgcgctcagcggccgggtggtgaccctggggcagcagctcatcgat
gacgggtcggcgatcgacatcgtcgccgaggagaaagaagcccagcccggcgaggacacg
tga
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