Vreelandella olivaria: HORIV_05000
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Entry
HORIV_05000 CDS
T06227
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
HORIV_05000 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hol03000
]
HORIV_05000 (dksA)
03021 Transcription machinery [BR:
hol03021
]
HORIV_05000 (dksA)
03009 Ribosome biogenesis [BR:
hol03009
]
HORIV_05000 (dksA)
Transcription factors [BR:
hol03000
]
Prokaryotic type
Other transcription factors
Others
HORIV_05000 (dksA)
Transcription machinery [BR:
hol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
HORIV_05000 (dksA)
Ribosome biogenesis [BR:
hol03009
]
Prokaryotic type
rRNA transcription factors
HORIV_05000 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DZR
Motif
Other DBs
NCBI-ProteinID:
BBI48079
UniProt:
A0ABN5WM44
LinkDB
All DBs
Position
complement(352925..353359)
Genome browser
AA seq
144 aa
AA seq
DB search
MPVAEKKPEASKSFTPYEPAPGEEYMNEQQLAHFRQLLLDWKQDLMEEVDRTVRHLQEDA
NNYDPADRATQEEGFSLELRTRDRERKLLKKINETIDKIDDDDYGFCEACGVEIGIRRLE
ARPTATLCVDCKTLAELKEKQLGG
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagcagaaaagaaaccggaagcgtccaagtccttcaccccgtatgagccagcg
ccgggtgaagagtatatgaacgagcagcagctagcgcacttccgtcagctgctgctggat
tggaaacaggatctcatggaagaggtggatcgtaccgtacgccacctgcaggaagatgcg
aataactacgaccccgccgaccgcgccacccaggaagagggctttagcctggaactgcgc
actcgggatcgcgagcgtaagctgctcaagaaaattaacgaaaccatcgataaaatcgat
gatgatgactacggcttctgcgaagcctgcggcgttgagatcggcatccgtcgtttagaa
gctcgccccaccgccaccctctgcgtggactgcaaaaccttggcagaactcaaggagaag
cagctcggcggctga
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