Haemophilus parahaemolyticus: E5Q53_02890
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Entry
E5Q53_02890 CDS
T06595
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
hpaa
Haemophilus parahaemolyticus
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpaa03009
]
E5Q53_02890 (rlmC)
Enzymes [BR:
hpaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
E5Q53_02890 (rlmC)
Ribosome biogenesis [BR:
hpaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E5Q53_02890 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_4
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_32
PALP
Motif
Other DBs
NCBI-ProteinID:
QEN11786
LinkDB
All DBs
Position
complement(629012..630190)
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AA seq
392 aa
AA seq
DB search
MKLNCQHFNQQQCRSCQWLEKDLSEQIFLKEEALKRLISPFILQNQTEILPPVMSEISHF
RNKAKMVVSGRVERPILGLLKDQNDSQSGVDLTDCPLYAKGIETLFPMLKDFIGRAGLVP
YNIAKKKGELKYILITQSQANQSVMLRFVLRSTQKQPLVEREFPALLAKLPANSVVSLNI
QPQHAAILEGETEIFLTEQTTIEENFNGIPLFIRPQGFFQTNPLVASQLYKTAQEWVKDL
PIQHCWDLFCGVGGFGLHCVNALQAKNPSVSLTGIEISASAIASATKSAEKLGLNNITFA
SLDSAQFAIHSSETQNRPDLVIVNPPRRGIGKALSEYLNELAPPYLIYSSCNAQTMAKDF
EVFTNYSLCKVQLFDMFPHTAHYEVLTLLVKK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaattgccaacactttaatcaacagcaatgccgttcttgccaatggctggaa
aaggatttatctgagcaaattttcctaaaagaagaagcactcaagcggttgatttcacct
tttattttgcaaaatcagacggaaattctaccgcctgtaatgtcagagatttcacacttt
cgaaataaagccaaaatggtggtaagtggtcgtgtagaacgcccgattttaggcttgcta
aaagatcagaacgattcacaaagtggcgtggatttaactgactgccctttgtatgctaaa
ggaattgaaacacttttcccaatgttaaaagattttatcggtcgagcgggattagtgcct
tataacattgcaaagaaaaaaggcgagctgaaatatatcctcattacgcaaagccaggct
aatcaatcggttatgttgcgttttgtgcttcgctcaacgcaaaaacaaccgcttgtagag
cgggaattccccgcattattagcgaaactacctgcaaattcagtggtgagtttaaatatc
caaccgcaacacgctgcgattttagaaggcgaaacggaaattttcctgacagagcagacg
acaattgaagaaaattttaacggcattccgctctttattcgtccgcaaggtttctttcaa
accaacccgcttgtggcaagccaattgtataagacagctcaagaatgggtaaaagatttg
cctattcagcactgttgggatctgttttgtggcgtgggagggtttggattacattgtgtc
aacgcattgcaagcaaaaaatccaagcgtttcactgacaggtattgaaatttctgcatcc
gccattgcgagtgccaccaaatcggctgaaaaattagggctgaacaacatcacgtttgcc
tcacttgactcggctcaatttgcgattcattcgagtgaaacacaaaaccgccccgattta
gtcattgttaatccgccaagaagagggattggcaaagcattgagtgaatatttaaacgag
cttgctccgccatatttaatttattccagctgtaacgctcaaaccatggcaaaagatttt
gaggtattcacgaattattcattatgtaaggtacaactctttgatatgtttccgcatacg
gcacattatgaggtactcacgttattagttaaaaaatag
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