Hafnia paralvei: AL518_17645
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Entry
AL518_17645 CDS
T05667
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpar03009
]
AL518_17645 (rumB)
Enzymes [BR:
hpar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
AL518_17645 (rumB)
Ribosome biogenesis [BR:
hpar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AL518_17645 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AMH19668
LinkDB
All DBs
Position
complement(3949717..3950850)
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AA seq
377 aa
AA seq
DB search
MHCALYQSGTCRSCQWLEMPYPQQIAEKQQQLELLMSDLPVERWLPSVSSAEQAFRNKAK
MVVSGSVERPLLGMLHRDGTAVDLCECPLYPQSFSAVFDVLKVFIARAGLTPYNVARKRG
ELKYLLLTESQKNNQLMLRFVLRSDAKLAQLRAALPWLQQQLPQLVVITTNIQPVHMAIL
EGDTEIFLTEQQALEESFNQVPLYIRPQSFFQTNPLVAASLYATARKWVHKLNISSMWDL
FCGVGGFGLHCATPEMKLTGIEISAEAIACATRSAQKIGLQNVQFSALDSTRFASAEGEV
PELVLVNPPRRGIGAELCEYLGKMAPDYILYSSCNAQTMAQDIARLKNYRIEQVQLFDMF
PHTAHYEVLTLLAHQTR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgccctgtatcaatcgggaacttgtcgctcttgtcagtggctggaaatgccg
tatccacagcaaatcgccgaaaagcagcaacagctggaattactgatgtctgacttaccg
gtcgaacgctggttaccgtcagtgagtagcgcagagcaagcatttcgtaacaaagccaaa
atggtcgtcagcggcagcgtggagcgtccactgctaggcatgttgcatcgtgatggaacg
gcggtcgatttatgtgagtgtcctctctatccccaatcttttagcgcagtgtttgatgtg
ctgaaggtgtttattgctcgcgcagggctaaccccctacaacgttgcgcgcaaacgtgga
gagctaaaatatctgttgctaactgaaagccagaaaaacaaccagctaatgctgcgtttt
gtgttgcgttctgacgctaaattagcccagttacgcgctgcgttgccttggctccaacaa
cagcttccacagttagtcgtgattaccacaaatatccagccggtgcatatggctatcctc
gaaggggataccgaaatatttcttaccgagcaacaggcgctagaagaatcttttaatcaa
gttccgctctatattcgcccgcaaagctttttccagaccaatccactggttgccgcatcg
ttatatgccacagcacgcaaatgggtacacaaactaaatatcagtagtatgtgggatctg
ttttgtggtgtcggtggttttggtttgcattgcgcaacgccggagatgaagctcaccggt
attgagatcagcgcggaagctatcgcctgcgccacgcggtctgcgcagaaaattggatta
cagaatgtacagttttccgcgctcgactcgacccgttttgcctcggcggaaggtgaggtt
cccgagttggtgctcgtcaatccaccgcgcagggggatcggtgctgaactgtgtgaatat
cttggcaaaatggcgccggattatattctctattccagctgcaatgctcagacaatggct
caagatattgcgagactgaaaaattatcgtatcgagcaggtgcaactgttcgatatgttc
ccgcataccgcccattatgaagtgctaacgctgctggcccatcaaacgcgataa
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