Glaesserella parasuis ZJ0906: K756_07105
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Entry
K756_07105 CDS
T02697
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hpaz
Glaesserella parasuis ZJ0906
Pathway
hpaz03030
DNA replication
hpaz03410
Base excision repair
hpaz03420
Nucleotide excision repair
hpaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K756_07105 (ligA)
03410 Base excision repair
K756_07105 (ligA)
03420 Nucleotide excision repair
K756_07105 (ligA)
03430 Mismatch repair
K756_07105 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpaz03032
]
K756_07105 (ligA)
03400 DNA repair and recombination proteins [BR:
hpaz03400
]
K756_07105 (ligA)
Enzymes [BR:
hpaz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
K756_07105 (ligA)
DNA replication proteins [BR:
hpaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K756_07105 (ligA)
DNA repair and recombination proteins [BR:
hpaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
K756_07105 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K756_07105 (ligA)
MMR (mismatch excision repair)
DNA ligase
K756_07105 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K756_07105 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
DNA_pol_lambd_f
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
16165811
NCBI-ProteinID:
AGO16579
UniProt:
A0A806J4N5
LinkDB
All DBs
Position
complement(1340374..1342401)
Genome browser
AA seq
675 aa
AA seq
DB search
MPHSIETQLEHLREKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITSDSPT
QRVGAKPLDGFAQITHEIPMLSLDNAFSDDDLTGFLRRIEDRIAINSNQIEFCCEPKLDG
LAVSILYVDGVLTQAATRGDGTTGEDITANIRTIRNIPLKLKSSNPPHRLEVRGEVFMPQ
QGFEQLNEKALAKGEKTFANPRNAAAGSLRQLDPKITRQRPLMLNAYNIGVYESDDELPT
THFDRLQWLKTLGIPVNAEITLATGSQALTAFYQKIQAKRSSLGYDIDGTVLKVNKIVLQ
EQLGFISKAPRWAIAYKFPAQEEMTILNDVEFQVGRTGAITPVAKLEPVFVAGVTVSNAT
LHNGDEIERLGIAIGDTVIIRRAGDVIPQIVGVVAERRLDNAKKIAFPTACPVCNSAVVR
VEGEAVARCTGGLFCGAQRKEALKHFVSRKAMDIDGVGEKLIEQLMERELIRTPADLFKL
DHTTLMRLERMGEKSANNALQSIEKAKNTTLARFLFALGIRDVGESTAQNLANHFGTLDA
IRQADLDTLKQVQDVGEVVANRLFQFWQEPHNIEVVEDLIAQGVKWQDVVPQEIADNPLK
DKTVVLTGTLTQLTRDQAKALLQQLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGVKI
LSEDELIGYFTTIVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccacactctattgaaacccaacttgaacatttgcgtgaaaaattgcgtgaatatgaa
taccactaccacgttttagataatccgcttgtgcccgatgcagaatatgatcgcttgatg
aacgagttaaaaaatctggaatggcaacaccccgaattgattacgtccgattcaccgacg
caacgagtcggtgctaagccgttagatggatttgctcaaattacccacgaaattccaatg
ctttctctggataacgccttttcagatgatgacctcacaggctttttgcgtcgtattgaa
gatcgtattgcgatcaacagtaatcaaattgaattttgttgtgagccgaaacttgatggc
ttagcggtgagtattctgtatgttgacggagtgctaacccaagcggcaactcgtggcgac
ggaacaacaggggaagatattaccgccaatatccgcacgatccgtaatattccgttaaaa
ctaaaaagtagtaatccgccacatcgtttagaagtgcgtggtgaagtttttatgccacag
cagggctttgaacaattaaatgaaaaagcactggcaaaaggtgagaagacctttgctaac
ccgcgtaatgcagcggcaggttcacttcgtcagctcgatccgaaaatcactagacaacgt
ccgttaatgttgaatgcctataacattggggtttatgaaagtgatgatgaactccctacg
acacattttgaccgcttgcagtggttaaaaaccctggggattcctgtcaatgctgaaatt
accttagcaacaggttctcaagccttgactgcgttttatcaaaaaatccaagccaaacgt
agttcgctgggttacgacattgacggcacggtgttgaaagtcaataagattgtgctgcaa
gaacagcttggctttatctcaaaagcacctcgttgggcaattgcttacaaattccctgca
caagaagagatgacgattctgaacgatgttgaatttcaggtcggcagaacaggggcaatt
actccagtggcaaaattagaacctgtctttgtggctggggtaacggtgagcaatgccacc
ttacataacggtgatgagattgagcgtttagggatcgcaattggtgataccgtgattatt
cgccgagcaggtgatgttattccgcaaattgtgggcgttgtggctgaacgtcgtcttgac
aatgcaaaaaaaattgcttttccgaccgcttgtcctgtgtgtaactcagctgtggtgcgt
gtcgagggcgaagcggttgctcgttgtactgggggattattctgcggagcccaacgtaaa
gaggcgttaaagcatttcgtttcacgcaaagcaatggatattgatggcgtgggtgaaaaa
ctgattgaacaactgatggaacgtgagctgatccgtaccccagcagatctatttaaactc
gatcacaccaccttgatgcgtttagagcgaatgggggagaaatctgccaataacgcacta
caaagtatcgaaaaggcaaaaaataccacccttgcccgcttcttatttgctttgggtatt
cgagatgtcggcgaatctaccgcacaaaatctcgcaaatcactttggtacgcttgatgcg
attcgccaagcggatttagacacgctaaaacaggtacaagatgtaggggaagttgtggca
aaccgtctattccaattctggcaagaaccacataatattgaagtcgtggaagatctgatt
gctcaaggggtgaagtggcaagatgtggtgccacaagagattgcagacaatccattaaaa
gataaaacagtggtactaacagggacattaacacagctcacccgtgatcaagcaaaagcc
ttattacagcaattgggttgtaaagtatctggcagtgtatcaagtaaaacggattatttg
attgcaggggaaaaggctggttcaaaattggcaaaagcacaggaattgggagtgaaaatt
ttgagtgaggacgagttaattggatattttacgactatagtatcgtaa
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integrated database retrieval system
