Halomonas sp. H5: ACQ1W9_08845
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Entry
ACQ1W9_08845 CDS
T11362
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hphz Halomonas sp. H5
Pathway
hphz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACQ1W9_08845 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hphz03400
]
ACQ1W9_08845 (nth)
Enzymes [BR:
hphz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACQ1W9_08845 (nth)
DNA repair and recombination proteins [BR:
hphz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACQ1W9_08845 (nth)
Prokaryotic type
ACQ1W9_08845 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XUK19985
LinkDB
All DBs
Position
complement(1895578..1896213)
Genome browser
AA seq
211 aa
AA seq
DB search
MNAEKRFEIFARLRDHNPEPTTELDWSSPFELLTAVLLSAQATDVGVNKATARLFPLANT
PQAILDLGLDGLKEHIKTIGLYNTKAENLMKTCRILLDRHGGEVPRTRAALEALPGVGRK
TANVILNTAFGQPTIAVDTHIFRVANRTGIAKGKDVLEVEKKLLRHVPREFRQDAHHWLI
LHGRYTCVARRPRCGSCVIEDLCEFKDKVEL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgagaaacgcttcgagatcttcgcgcggctgcgcgaccacaaccccgagccc
accaccgagctcgactggagcagccccttcgaactgctcaccgcggtgctgctctccgcc
caggccaccgacgtgggggtcaacaaggccaccgcccgcctctttcccctggccaatacc
ccccaggcgatcctcgacctgggcctcgacggcctcaaggagcacatcaagaccatcggc
ctctacaacaccaaggccgagaacctgatgaagacctgccgcatcctgctcgaccgccac
ggcggcgaggtgccgcggacccgggccgccctggaggcgctgccgggggtggggcgcaag
accgccaacgtcatcctcaacaccgccttcggccagcccaccatcgccgtggacacccat
atcttccgggtcgccaaccgcaccggcatcgccaagggcaaggacgtgctggaggtggag
aagaagctgctgcgccatgtgccccgggagttccgccaggacgcccaccactggctgatc
ctgcatggccgctacacctgcgtggcccgcaggccccgctgcggcagctgcgtgatcgag
gacctctgcgagttcaaggataaggtcgagctctag
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