Haemophilus pittmaniae: NCTC13334_01680
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Entry
NCTC13334_01680 CDS
T06001
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13334_01680 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_01680 (nth)
Enzymes [BR:
hpit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC13334_01680 (nth)
DNA repair and recombination proteins [BR:
hpit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13334_01680 (nth)
Prokaryotic type
NCTC13334_01680 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
SNV85512
LinkDB
All DBs
Position
1:1722625..1723260
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AA seq
211 aa
AA seq
DB search
MNQAKRIEILRRLRDQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATAKLFPVANT
PEAIWALGVDGLKEYIKTIGLFNAKAENIIKTCRDLIDKHQSQVPEDRAALEALAGVGRK
TANVVLNTAFGHPTIAVDTHIFRVCNRTQFAPGKDVVKVEEKLNKVVPAEFKVDVHHWLI
LHGRYTCIARKPHCGSCIIEDLCEYKDKTEY
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggccaaaagaattgagattttacgccgtctgcgcgatcaaaatccccacccc
acaacggaattacagtataattcgcccttcgaattattgattgccgtgattttatccgcg
caagcaacggataaaggcgtcaacaaagctaccgctaaattattcccggtagccaacacg
cctgaagccatttgggcgctcggggttgatggtttaaaggaatatatcaaaaccatcgga
ctatttaatgcgaaagcagaaaatatcatcaaaacctgtcgagatttaatcgacaaacac
caaagccaagtaccggaagatcgcgccgccttagaagcgctcgccggtgtaggtcgtaaa
accgctaatgtggtattgaatacggcctttggccacccgaccattgccgtggacacccac
attttccgcgtgtgcaaccgaacccaatttgctcccggcaaggatgtcgtcaaagtggaa
gaaaaactcaataaagtggtgcctgccgaatttaaggtggatgtgcatcattggctcatt
ttacatggccgctatacctgtattgcgcgcaaaccccattgcggttcgtgcattattgaa
gatttatgcgaatacaaagataaaaccgaatattga
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