Haemophilus pittmaniae: NCTC13334_02065
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Entry
NCTC13334_02065 CDS
T06001
Symbol
rlmC
Name
(GenBank) 23S rRNA m(5)U747 methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
hpit
Haemophilus pittmaniae
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpit03009
]
NCTC13334_02065 (rlmC)
Enzymes [BR:
hpit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC13334_02065 (rlmC)
Ribosome biogenesis [BR:
hpit03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC13334_02065 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_32
UPF0020
Methyltransf_15
GFO_IDH_MocA
N6_Mtase
Methyltransf_11
Cons_hypoth95
Methyltransf_4
TrkA_N
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
SNV89738
LinkDB
All DBs
Position
1:complement(2171472..2172647)
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AA seq
391 aa
AA seq
DB search
MITCHHYQKGDCHSCQWLATPYAQQLTHKEKHLKQQLAELDCEALIWHPPFRSAESAFRN
KAKMVVSGAVERPILGILQDPNDPQSAVDLCDCPLYPKRFAELFPVLKDFIGRAGLVPYN
VAKQKGELKYILLTESQHTKKLMLRFVLRSETKLPLIQREFAGLLEKLPQLEVVSVNIQP
QHAAILEGEKEIFLTDQHTLSESFNGIPLFIRPQGFFQTNPLVAQGLYATAQDWVQDLPI
AKLWDLFCGVGGFGLHCAKALQDKHQQEVELTGIEISPSAIQAATQSAQVLGLNNVKFQS
LDAANFALAQDENKPDLVIVNPPRRGIGKELAEFLNEMQPHFILYSSCNAVSMGKDLQHL
TNYKLTQIQLFDMFPHTAHYEVLLLLKHIDI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctgtcatcattatcaaaagggggattgccattcttgccaatggttggcaaca
ccttacgcacagcaactgacccacaaagagaaacacctgaaacaacaactggcagagtta
gattgtgaggcgcttatttggcatccgccttttcgttccgctgaatctgcttttcgcaat
aaggccaaaatggtggtgagtggcgcggtagagcgtccaattttaggtattttacaagac
ccaaatgatccacaaagtgcggtggatttatgtgattgcccgctttaccccaaacgcttt
gctgaactctttccagttttaaaagattttattggacgcgctggtttagtcccttataac
gtggctaagcaaaaaggtgagctgaaatatattctgcttacagaaagccaacatacaaaa
aaattgatgttgcgttttgtattgcgttcagaaactaaattaccgttaattcaacgtgaa
tttgccgggctattggaaaaattgccacagcttgaagtggtgagtgtaaatatccaacct
caacacgcagcgatcttagaaggtgagaaagaaatctttttgacggaccagcacacctta
tcagaaagctttaacggtattccgttgtttattcgccctcaaggtttcttccaaacgaat
ccacttgtagcacaagggctatatgcaacggcacaagattgggtgcaagatttgccgatt
gctaaactctgggatctcttttgtggcgttggaggatttggactgcattgtgctaaagct
ttacaagataaacatcaacaagaagtggagttgacggggattgaaatttcgccatctgct
attcaagcggcgactcaatccgctcaggtgttagggttaaacaacgttaaattccaatca
ttggatgcggctaattttgctttagcacaagatgaaaataaacccgatttggtgatcgtc
aacccgcctcgtcgaggcattggaaaggaacttgctgaatttctcaatgaaatgcaaccg
cactttattctttattccagttgcaatgctgtttccatgggaaaagatttgcaacaccta
accaattataaacttactcaaattcaattatttgatatgtttccccatacggcacattat
gaagtattgctgctattaaagcatattgatatctaa
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