Helicobacter pylori 35A: HMPREF4655_20672
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Entry
HMPREF4655_20672 CDS
T01892
Symbol
ispD
Name
(GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00900
Terpenoid backbone biosynthesis
hpo01100
Metabolic pathways
hpo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HMPREF4655_20672 (ispD)
Enzymes [BR:
hpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
HMPREF4655_20672 (ispD)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
HMPREF4655_20672 (ispD)
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Gene cluster
GFIT
Motif
Pfam:
YgbB
IspD
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
ADU40800
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All DBs
Position
complement(648710..649930)
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AA seq
406 aa
AA seq
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MSLIRVNGEAFKLSLESLEEDPFETKETLETLVKQTSVVLLAAGESKRFSQTIKKQWLRS
NHTPLWLSVYESFKEALDFKEIILVVSELDYIYIKRHYPEIKLVKGGASRQESVCNALKI
IDSAYTLTSDVARGLANIEALKGLFLTLQQTSHYCIAPYLPCYDTAIYYNEALDREAIKL
IQTPQLSHTKTLQSALNQGYFKDESSAILQAFPNLVSYIEGSKDLHKLTTSGDLKHFALF
FNPAKDTFIGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAILGAIKG
GDIGEWFPDNDPQYKNASSKELLKIVLDFSQSIGFELLEMGATIFSEIPKITPYKPAILE
NLSQLLGLEKSQISLKATTMEKMGFIGKQEGLLVQAHVSMRYKQKL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgattagagtgaatggggaagcttttaaactctctttagaaagtttggaagaa
gacccttttgaaactaaagaaacgctagaaacgcttgttaaacaaacgagcgttgtttta
ttggctgctggggaatcgaaacgattttctcaaacaatcaaaaaacaatggctacgctct
aatcatacccccttatggctcagcgtttatgaaagctttaaagaagccctagactttaaa
gaaatcattctagtcgtaagcgaattggattatatttatatcaaacgccattaccctgaa
atcaagcttgtaaaaggcggggcatcaaggcaagaatccgtgtgtaacgctttaaaaata
attgatagcgcttacacgctcaccagcgatgtggctaggggtttagccaatattgaagcg
ctcaaaggtttgtttttaaccctccaacaaaccagccattattgcatcgctccttacttg
ccttgctatgacacagcgatctattataacgaggctttagacagagaagcgatcaaactc
attcaaaccccgcaattaagccacaccaaaacgctccaatcagccctaaatcaagggtat
tttaaagatgaaagcagcgcgattttacaagctttccctaatttggtgagttatattgaa
ggcagtaaggatttgcacaagctcaccacgagcggcgatttgaagcattttgcgctcttt
tttaacccagcaaaagacacttttataggtatgggctttgatacgcatgcattcattaaa
gataagcctatggttttaggaggggttgttttggattgcgagtttgggttaaaggcccat
agcgatggcgatgctttgttgcatgcggttattgatgcgattttaggagcgattaaaggg
ggggatattggcgaatggttccctgataatgacccgcaatacaaaaacgcctcttctaaa
gagcttttaaaaatcgtgttggatttttctcaaagcattgggtttgaattgcttgaaatg
ggggcgaccatctttagcgaaatccccaaaatcactccttacaaaccggcgattttagag
aatttgagccaacttttgggtttagaaaaatctcaaatcagcttgaaagccaccacaatg
gaaaaaatggggttcattggcaaacaagaagggctgttagtccaagcgcatgtgagcatg
cgttataaacaaaaactttaa
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