Helicobacter pylori 35A: HMPREF4655_21016
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Entry
HMPREF4655_21016 CDS
T01892
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF4655_21016 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpo03400
]
HMPREF4655_21016 (nth)
Enzymes [BR:
hpo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF4655_21016 (nth)
DNA repair and recombination proteins [BR:
hpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF4655_21016 (nth)
Prokaryotic type
HMPREF4655_21016 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
IZUMO
Motif
Other DBs
NCBI-ProteinID:
ADU41111
LinkDB
All DBs
Position
1003621..1004277
Genome browser
AA seq
218 aa
AA seq
DB search
MKMGLKRAKTYQKAQQIKKLLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITP
KLFEKYSSVKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELM
SLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLFKDNLS
KLHHALILFGRYTCKAKNPLCSACFLKEFCVSKASFKA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgggtttaaaacgcgctaaaacttaccaaaaagcccaacaaatcaaaaaactg
cttttaaaacattaccccaaccaaaccaccgaattgcaccataaaaacccctatgaattg
ctagtggctaccattttaagcgctcaatgcacggacgctagagtgaataaaataacgccc
aagttatttgaaaaatactcaagcgtgaaggatttagcgctcgcttctttagaagaagtt
aaagaaattatcaaatccgtttcttatttcaacaataaaagcaagcatttaatcagtatg
gcgcaaaaagtggttagggattttaagggcgttatcccctctacgcaaaaagaattgatg
agcctagatggcgtggggcaaaaaaccgctaatgtggtgctttcagtgtgctttgatgca
aattacatagcggtagatacccatgtgttccgcacgacgcaccgcttaggattaagcaac
gctaacacgcccattaaaaccgaagaagaactcagcgatcttttcaaagacaacctatcc
aaactccaccatgcattaatcttgtttggccgctacacctgcaaggctaaaaacccctta
tgtagcgcgtgttttttaaaagaattttgcgtttctaaggctagctttaaagcgtag
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