Haemophilus parainfluenzae: PARA_07920
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Entry
PARA_07920 CDS
T01605
Name
(GenBank) DNA ligase, NAD(+)-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hpr
Haemophilus parainfluenzae
Pathway
hpr03030
DNA replication
hpr03410
Base excision repair
hpr03420
Nucleotide excision repair
hpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PARA_07920
03410 Base excision repair
PARA_07920
03420 Nucleotide excision repair
PARA_07920
03430 Mismatch repair
PARA_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpr03032
]
PARA_07920
03400 DNA repair and recombination proteins [BR:
hpr03400
]
PARA_07920
Enzymes [BR:
hpr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PARA_07920
DNA replication proteins [BR:
hpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PARA_07920
DNA repair and recombination proteins [BR:
hpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PARA_07920
NER (nucleotide excision repair)
GGR (global genome repair) factors
PARA_07920
MMR (mismatch excision repair)
DNA ligase
PARA_07920
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PARA_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
HHH_3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
CBW14899
UniProt:
A0AB33QHK7
LinkDB
All DBs
Position
780530..782533
Genome browser
AA seq
667 aa
AA seq
DB search
MSLQQQIDTLRQDLRRYEYEYHVLDNPTIPDAEYDRLFHQLKALEAAHPELITADSPTQR
VGAKPLSGFAQIRHEIPMLSLDNAFSDEEFYAFVKRIEDRLIRLPDPLTFCCEPKLDGLA
VSILYVNGVLTQAATRGDGTTGEDITANIRTIRNIPLQLLMDNPPARLEVRGEVFMPHEG
FERLNQQALEKGEKTFANPRNAAAGSLRQLDPKITSKRPLVLNAYGIGIAEGVDLPNTHY
DRLQWLKSIGIPVNPEIRLCNGTDEVLDFYRDIQNKRSSLGYDIDGTVLKINDIALQEKL
GFISKAPRWAIAYKFPAQEELTRLNDVEFQVGRTGAITPVAKLEPVFVAGVTVSNATLHN
GDEIERLDIAIGDMVVIRRAGDVIPQIIGVLHDRRPADARPIVFPETCPVCDSAIVRIEG
EAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGGKLIEQLVDRELIHTPADLFKLDLT
ALTRLERMGTKSAENALASLEKAKNTTLARFVFALGIREVGEATALNLANHFKTLEALQN
ADLEALQQVPDVGEVVANRILAFWHEPHNVAVVNDLIAQGVHWETVEAKEVIENRFKGKT
VVLTGTLTQMGRNEAKALLQDMGAKVSGSVSAKTDFVIAGDAAGSKLTKAQELGVTVLTE
EEFLAQI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcagcaacaaattgatacattacgtcaggatcttcgtcgttatgaatatgaa
tatcacgtgttggataatccaaccattcctgatgcagaatatgatcgtttatttcaccaa
cttaaagccttagaagccgcccatccggaactcattacggcagattcacctactcaacgt
gtgggcgccaaaccactttcaggttttgcacaaattcgtcatgaaattccaatgttgtct
ttagataatgcattttcagacgaggaattttatgcattcgtaaaacgcattgaagatcgt
cttattcgtttgcctgacccgcttactttttgttgtgaaccgaaattagatggtttagcg
gtgagtattttgtatgtgaatggcgtactgactcaagcggcaacccgtggtgatggaaca
acaggggaagatattaccgcgaatattcgtacgattcgaaatattcccttgcagctttta
atggacaatcctcccgctcgtttagaagtgcgcggtgaagtgtttatgccacatgaaggc
tttgagcgtttaaatcaacaggctttagagaaaggcgagaaaacctttgctaacccacgt
aatgcagcggcaggatcgttgcgtcagcttgatcctaaaattacgagtaaacgtccattg
gtcttgaatgcttatggtattggcattgcggaaggcgtagatttgccgaatacgcattat
gatcgtttgcaatggctgaagtctattggcattccggtaaacccagaaatccgtttatgt
aacggcacagatgaagtgttggatttttatcgtgatattcaaaataaacgcagttctctt
ggctacgatattgatggtaccgtgctaaaaattaatgatattgcgttacaagagaaatta
ggttttatttccaaagcgccgcgttgggcaattgcttataaattccctgcacaagaagaa
ttaactcgcctaaatgacgtggaattccaagtaggcagaacgggggcgattacaccagtg
gcaaaattagaaccggtatttgttgctggtgtcacggtgagtaacgccacattgcataac
ggtgatgaaatcgaacgcttggacattgcgattggcgatatggtagtgattcgtcgtgca
ggggatgtgatcccacaaattatcggcgtgttgcacgatcgtcgcccagcggatgcgaga
ccgattgttttccctgagacttgtcctgtatgtgattcggcaattgttcgtattgaaggc
gaagcggtagcgcgttgtacaggcggtttattctgtgcagcacagcgtaaagaagcgctt
aaacatttcgtttctcgcaaggccatggatattgatggcgtaggggggaaattaatcgag
cagttggtggatcgtgagttaattcatacacccgccgatttatttaagttagatttaacc
gcgctgactcgcttggaaagaatgggtacaaaatcagctgaaaatgcgttagcgagcctt
gaaaaagcaaaaaatacgacgttagcacgttttgtttttgctttagggattcgtgaagtg
ggtgaagcaacggcattgaatttagcgaatcattttaaaaccctggaagccttgcaaaat
gcagatttagaagccttacagcaagtgcctgatgtgggcgaagtggtggctaatcgtatt
ttagcattttggcatgaaccacataatgtcgcggtggtgaatgatttaatcgctcaaggc
gtacattgggaaactgtagaagccaaagaagtgatagaaaaccgcttcaaaggcaaaacg
gttgtattaaccggaactttaactcaaatggggcgtaatgaagctaaagccttattacaa
gatatgggcgcgaaagtgagtggatcggtttcagcaaaaacggattttgtgattgccggt
gatgcggcgggttctaagctcacaaaagcacaggaattaggtgttaccgttctaacggaa
gaagaatttttggctcagatttaa
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