Helicovermis profundi: HLPR_09030
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Entry
HLPR_09030 CDS
T09891
Symbol
vmeC
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit VmeC
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hprf
Helicovermis profundi
Pathway
hprf01501
beta-Lactam resistance
hprf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HLPR_09030 (vmeC)
01503 Cationic antimicrobial peptide (CAMP) resistance
HLPR_09030 (vmeC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hprf03036
]
HLPR_09030 (vmeC)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hprf02000
]
HLPR_09030 (vmeC)
01504 Antimicrobial resistance genes [BR:
hprf01504
]
HLPR_09030 (vmeC)
Chromosome and associated proteins [BR:
hprf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HLPR_09030 (vmeC)
Transporters [BR:
hprf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HLPR_09030 (vmeC)
Antimicrobial resistance genes [BR:
hprf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HLPR_09030 (vmeC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
BEP28572
UniProt:
A0AAU9E9S6
LinkDB
All DBs
Position
complement(1043294..1044424)
Genome browser
AA seq
376 aa
AA seq
DB search
MKNKKRMITLIIILAVAVLFGLRIGGNLQNKRSSKINPSQSFAEDSIKATPITIARVKKE
KIDDTIFTIGEVSPTTKYNVNSKLNGEVDKIYFKVGDTVKKDDLLFTMKSDVYSSDKNSN
LSKLKNQLDIAKTSLSQAKKSFDDTKKLFELGASSKDQLDRASLNYDNSNANYKNALSSY
NSLKVSYSNQNDLYKVKSPVDGIITTKNIEEGMFASQSNGFTIITNKSLLIKSKISSKYI
NSIKVDQEVDIYINTIDRNYKGFVSSISYSAVKGSYPIEVTIIKPDEFIYSGMYGELKVK
LTTKENVLTVPLNSIVKENNDSYVYKIINDTAIKTTIKTGIINNNFVEVSGNIKTNDKVA
LKGKEFLKDNSKVMIQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaaaaagaatgataactcttataataatattagctgtagcagtactattt
ggactaagaattggaggaaatttacaaaacaaaagatcatccaaaattaacccatcacag
agttttgccgaggactctataaaagctactcctataacaatagctagggtaaaaaaagaa
aaaatagatgatactatttttacaattggcgaagtatctcctactacaaaatataatgta
aattcaaaattgaacggtgaagtcgataaaatttatttcaaagttggagatactgtaaaa
aaagatgatctactatttactatgaaatctgatgtttattcatcagacaaaaactcaaat
ttatcaaaattaaaaaaccaactagatattgcaaaaacatctctatctcaagcaaaaaag
agttttgacgatactaaaaaactttttgaattaggagcttcttcaaaggatcaattagac
agagcatcattaaactatgataattcaaatgctaattataaaaacgcacttagttcatat
aacagtttaaaggtatcatatagtaatcaaaatgatttatataaagtaaaaagtccagtt
gatggcataataacaacaaaaaatattgaagaaggcatgtttgcatctcaaagtaatgga
tttactattattacaaataaatctttactaattaaatcaaaaatatcatcaaaatatatt
aattcaattaaagtagatcaagaagtagatatttatattaatactattgatagaaattac
aaaggctttgtatcatctatatcatatagtgcggttaaaggttcttacccaattgaagta
acaataataaagcctgatgaatttatatattctggaatgtacggagaacttaaggttaag
cttactactaaggaaaatgttcttacagttcctttaaactcaattgttaaagaaaataat
gattcatatgtttataaaattattaatgatactgccattaaaactactattaaaacagga
attataaataataattttgtagaagtaagtggaaatataaaaacaaatgataaagtagct
ctaaaaggaaaagaatttcttaaagataattcaaaagtcatgatacaataa
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