Helicovermis profundi: HLPR_16540
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Entry
HLPR_16540 CDS
T09891
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hprf
Helicovermis profundi
Pathway
hprf01501
beta-Lactam resistance
hprf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HLPR_16540
01503 Cationic antimicrobial peptide (CAMP) resistance
HLPR_16540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hprf03036
]
HLPR_16540
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hprf02000
]
HLPR_16540
01504 Antimicrobial resistance genes [BR:
hprf01504
]
HLPR_16540
Chromosome and associated proteins [BR:
hprf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HLPR_16540
Transporters [BR:
hprf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HLPR_16540
Antimicrobial resistance genes [BR:
hprf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HLPR_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
HlyD_2
CusB_dom_1
Biotin_lipoyl_2
OEP
EF1G
Motif
Other DBs
NCBI-ProteinID:
BEP29323
UniProt:
A0AAU9E7D6
LinkDB
All DBs
Position
1886073..1887170
Genome browser
AA seq
365 aa
AA seq
DB search
MKLKNISIFILIIVISFSFASCTKNDEKDAIPKEISTSTKEAIHVKTEKIAYKDFNTNLS
ITSVVVPKDSAYISSKSSGIVKDIYFDVGSNIKVNDELIKLDDENLIVQKNKILLSIKIA
RFNLENNKKDLNDYKALYEKGAVTKKNLQALENKYKASEFSLESAKYDFDSLQLAIKNTS
IKSPIDGIVTEKNIASGESINPGTRCFKIIDISSVYSSAGVSESFINNIKKGQEVKVTSA
DTGKVYSGVIASINPEMNPLTKKYDIKVLIDNSDLNLKPGMSTVLSFDVNKTLKVLSVNK
LSLILIDSKNYVFINDNGTAKKTEITIGNSTDNYYEVLSGLNANSEVVTSGSGLLKDGDL
IVVEK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaaaacatttcaatttttattctaattatagttatttcgttttcatttgct
tcatgtacaaaaaatgatgaaaaagatgcaattcctaaagaaatatctacaagtacaaaa
gaagctatacatgttaaaaccgaaaaaatagcttacaaagattttaatactaatttatct
attacttcagttgtagttccaaaagacagtgcttatatttcttcaaaatcaagcggtatt
gttaaagatatttactttgatgttggctccaatattaaggtgaatgatgaacttatcaaa
cttgatgatgaaaacttaattgttcaaaaaaataaaattcttctttcaattaaaattgct
agattcaatttagaaaataataaaaaggatttaaatgattataaagctctttatgaaaaa
ggtgctgttactaaaaaaaatcttcaagcattagaaaacaagtataaagcatctgaattt
tcacttgagagcgctaaatatgattttgattcacttcaactagctataaaaaatacttca
atcaaatcaccaattgatggtatagtaactgaaaaaaatattgctagtggtgaatcaata
aacccaggaacaagatgctttaaaataattgatatttcaagcgtatattcatcagcaggt
gtttcagaaagttttataaataatataaaaaaaggacaagaagttaaagtaacttcggca
gatactggtaaagtttacagcggagtaattgcaagtatcaatcctgaaatgaatccctta
acaaaaaaatatgatattaaagtactaattgataatagtgacttaaatttaaaacctggt
atgagtacagttctctctttcgatgttaataaaactttaaaagttttatcagtaaataaa
ctttctcttatattaattgattctaaaaattatgtttttattaatgataatggaactgct
aaaaaaactgaaattactattggtaattcaactgataattactatgaagttcttagcgga
ttaaatgctaatagtgaagtagttactagcggaagtggtttattaaaagatggagattta
attgtagtagagaaataa
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