Helicovermis profundi: HLPR_19880
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Entry
HLPR_19880 CDS
T09891
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hprf
Helicovermis profundi
Pathway
hprf01501
beta-Lactam resistance
hprf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HLPR_19880
01503 Cationic antimicrobial peptide (CAMP) resistance
HLPR_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hprf03036
]
HLPR_19880
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hprf02000
]
HLPR_19880
01504 Antimicrobial resistance genes [BR:
hprf01504
]
HLPR_19880
Chromosome and associated proteins [BR:
hprf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HLPR_19880
Transporters [BR:
hprf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HLPR_19880
Antimicrobial resistance genes [BR:
hprf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HLPR_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Biotin_lipoyl
BSH_YknX
HH_YBHG
BSH_RND
Beta-barrel_YknX
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
BEP29657
UniProt:
A0AAU9EFX1
LinkDB
All DBs
Position
2232919..2234019
Genome browser
AA seq
366 aa
AA seq
DB search
MNKKIISILLLVSTTILIFSACTPSQKVVKEKVKLVKVKEAKVQIKNESIKYFGFIEPSM
VKALSLKNSGKINKINITTGQKITKDMPLVSLDTYEYGLGVKASKEQINLASLDLDKAEK
SYDFYKKLYNDTLALYEKGAISKQKLDEIKLSYDINSSQYEQAKKNYSKSKIDLDYKSNS
VNDSTLIADMDGVVVDILKKEGEIYAAGYPIVLIRTNENIVNIGVSEKDIKRLTLNMKAS
IDVDGKKYSGTISKINLMPDKLSRTYSVQIKLNDGNFIIGQSSEVSFLLNKIKGIWLPIT
DILNDGEDYVYIVKDNRVVRKNIELHEINESFVRVSNLNNGDKIIVTATNSLTEGYKVKI
VGDTNE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaattataagtatactactactagtaagtactactatcctcattttttca
gcttgtactccttctcaaaaagttgttaaagaaaaagttaagctcgtaaaagtgaaagaa
gcaaaagttcagattaaaaatgaaagtattaaatattttggttttattgaaccaagtatg
gttaaagcactatcattaaaaaatagtggcaaaatcaataaaatcaatattacaacaggt
caaaaaataactaaagatatgcctttagtttcacttgatacttatgagtacggccttgga
gttaaagcctctaaagaacaaattaatctagcttccttagatcttgataaggcagaaaaa
tcttatgatttctataaaaaactatataatgatactttagctttatatgaaaaaggtgca
atttccaaacaaaaacttgatgaaattaaactttcatacgatataaattcatcacaatat
gaacaggcaaaaaagaactattctaaatcaaaaattgatttagattataaatctaattct
gtaaatgattcaacattaattgcagatatggatggcgtagtcgttgatattttgaaaaaa
gaaggggaaatatacgcagcaggatatccaattgttcttataagaaccaatgaaaatata
gtaaatattggagtcagtgaaaaagatattaaaagacttactttaaatatgaaagcaagt
atcgatgtagatgggaaaaaatacagtggaactatatcaaaaattaatttaatgccagat
aaactctcaagaacttattcagtacaaataaaactaaacgacggtaatttcattatcggt
caatcctcagaagtaagttttttacttaataaaatcaaaggtatttggcttcctattacc
gacattctaaacgatggcgaagattacgtatatatagttaaagacaatagagttgtaaga
aaaaatattgaactccatgaaataaatgaatctttcgtaagagtatcgaaccttaataat
ggcgataaaataattgttacagctactaattcacttactgaaggttataaagttaaaatt
gtgggtgatacaaatgaataa
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