Helicobacter pylori Shi470: HPSH_03825
Help
Entry
HPSH_03825 CDS
T00742
Name
(GenBank) cytoplasmic pump protein of the hefABC efflux system HefC
KO
K18138
multidrug efflux pump
Organism
hps
Helicobacter pylori Shi470
Pathway
hps01501
beta-Lactam resistance
hps01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPSH_03825
01503 Cationic antimicrobial peptide (CAMP) resistance
HPSH_03825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hps02000
]
HPSH_03825
01504 Antimicrobial resistance genes [BR:
hps01504
]
HPSH_03825
Transporters [BR:
hps02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HPSH_03825
Antimicrobial resistance genes [BR:
hps01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HPSH_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
ACD48200
LinkDB
All DBs
Position
complement(745135..748221)
Genome browser
AA seq
1028 aa
AA seq
DB search
MYKTAINRPITTLMFALAIVFFGTMGFKKLSVALFPKIDMPTVVVTTTYPGASAEIIESK
VTDKIEEAVMGIDGIKKVTSTSSKNVSIVVIEFELEKPNEEALNDVVNKISSVRFDDSNI
KKPSINKFDTDSQAIISLFVSSSSVPATTLNDYAKNTIKPMLQKINGVGGVQLNGFRERQ
IRIYADPTLMNKYNLTYADLFSTLKAENVEIDGGRIVNSQRELSILINANSYSVADVKKI
QVGNHVRLGDIAKIEIGLEEDNTFASFKDKPGVILEIQKIAGANEIEIVDRVYEALKHIQ
AISPSYEIRPFLDTTGYIRTSIEDVKFDLVLGAILAVLVVFAFLRNGTITLVSAISIPIS
IMGTFALIQWMGFSLNMLTMVALTLAIGIIIDDAIVVIENIHKKLEMGMNKRKASYEGVR
EIGFALVAISAMLLSVFVPIGNMKGIIGRFFQSFGITVALAIALSYVVVVTIIPMVSSVV
VNPRHSRFYVWSEPFFKALESYYTRLLQWVLNHKLIISIAVVLVFVGSLFVASKIGMEFM
LKEDRGRFLVWLKAKPGVSIDYMTQKSKIFQKAIEKHAEVEFTTLQVGYGTAQNPFKAKI
FVQLKPLKERKKERKLGQFELMSALRKELKSMPEAKGLESINLSEVSLIGGGGDSSPFQT
FVFSHSQEAVDKSVANLKKFLLESPELKGKVESYHTSTSESQPQLQLKILRQNANKYGVS
AQTIGSVVSSAFSGTSQASVFKQDGKEYDMIIRVPDNKRVSVEDIKRLQVRNKYDKLMFL
DALVEITETKSPSSISRYNRQRSVTVLAEPNRNAGVSLGEILTQVSKNTKEWLVEGANYR
FTGEADNAKETNGEFLIALATAFVLIYMILAALYESILEPFIIMVTMPLSFSGAFFALGL
VHQPLSMFSMIGLILLIGMVGKNATLLIDVANEERKKGLNIQEAILFAGKTRLRPILMTT
IAMVCGMLPLALASGDGAAMKSPIGIAMSGGLMISMVLSLLIVPVFYRLLAPIDDKIKRF
YQNQKTLE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaacagcgattaatcgtcctattacgaccttgatgttcgctttggcgattgtc
ttttttgggactatggggtttaaaaaattgagcgtggcgcttttccctaagattgatatg
cctacggtggtggttactacgacttatcctggagctagcgctgaaatcatagagagtaag
gtaaccgacaagattgaagaagcggtgatggggattgatgggatcaaaaaggttacttcc
acgagttctaaaaatgtgagtatcgtcgtcattgaatttgagttagaaaagcctaatgaa
gaagccttaaacgatgtggttaataaaatttcttcggtgcgttttgatgattctaacatt
aaaaaaccctctatcaataaatttgataccgacagccaagccattatttcgttgtttgtg
agcagttcaagcgtgcctgctacaacccttaatgactacgctaaaaacaccattaaaccc
atgctccaaaaaatcaatggggtagggggcgtgcagctcaacggctttagggagcgccag
attaggatttatgcagatcccactttaatgaataaatacaacctgacttatgcggatctt
ttcagcacgcttaaagcggagaatgtggaaattgatggggggcgcattgtcaatagccaa
agggaattgtctattttaattaatgcgaatagttacagcgttgcggatgtgaaaaagatc
caagtgggtaatcatgtgcgtcttggcgatattgcaaagattgaaatcggtttggaagaa
gacaacacttttgcgagctttaaagacaaacccggtgtgattttggaaatccaaaagatt
gccggagcgaatgaaattgaaatcgtagatagggtgtatgaagctttaaaacacattcaa
gccattagccctagctatgaaatcagaccttttttagacaccacgggctatatccgcacc
tctattgaagatgtgaaatttgacttagtcttaggggcgattttggcggttttagtggtg
tttgcgttcttgcgtaacggcacgatcactttagtttcagcgatctctatccctatttct
atcatggggacttttgcgctcattcaatggatgggcttttcattaaacatgctcaccatg
gtggctttaacgctagcgatagggattatcattgatgatgcgatcgtggtgattgaaaac
atccataaaaagctagaaatgggcatgaacaaacggaaagcaagctatgagggggtgagg
gaaattggctttgcgttagtggcgatttcagcgatgctgctctctgtttttgtgcctata
gggaacatgaaaggcattattgggcgctttttccaaagctttgggatcacggtggcttta
gcgatcgctctatcgtatgtggtggtcgttacgattatccccatggtaagctcagtcgtg
gtcaatcccaggcattctcgtttttatgtgtggagtgagcctttttttaaggctttagag
tcttattacaccagattgctccaatgggtattaaaccacaagctcattatctctatagcg
gtggttttggtgtttgtgggttcgctttttgtggcttctaagatcggtatggagttcatg
ctgaaagaagatagggggaggtttttagtgtggcttaaggctaaaccgggcgtgagcata
gattacatgacacaaaagagtaagatctttcaaaaagcgattgaaaagcatgctgaggtg
gaatttaccaccttgcaagtgggttatggcaccgcacaaaacccttttaaggctaagatt
tttgtgcaactcaagcctttaaaagagcgtaaaaaagagcgcaaattggggcaatttgag
ttgatgagcgctttaaggaaggaattaaaaagcatgcctgaagctaaaggtttagagagt
attaatctttctgaagtctctcttatagggggcggtggggatagttcgcccttccaaacc
tttgtgttttcccattctcaagaagcggtggataaaagcgtggcgaatttgaaaaaattc
ttattggaaagccctgaattaaaaggcaaggttgaaagctaccatacaagcacgagcgaa
tcgcaaccgcaactgcaactgaaaatcttaagacaaaacgccaacaaatacggcgtgagc
gctcaaaccattggctcagtggtgagctctgctttctctgggacttctcaagcgagcgtg
ttcaagcaagatggtaaagaatacgacatgattattagagtgcctgataacaagcgcgtt
tctgtagaagacatcaaacgcttgcaagtgcgtaataaatacgataaattgatgttttta
gacgctttagtggaaatcacagaaactaaaagcccttccagtatttctcgctataaccgc
caacgcagcgttacggtgcttgctgagcctaataggaatgcgggcgtttctttgggcgag
attttaacgcaagtgagcaaaaacactaaagagtggctggttgaaggggcgaattacaga
ttcaccggagaagcggataacgccaaagagaccaatggggagtttttgatcgctctagcg
acagcgtttgtgttgatttacatgattttagcggcgttgtatgagtccattttagagcct
tttattatcatggttaccatgcctttaagcttttcaggggcgttttttgctctgggttta
gtccatcagcctttgagcatgttctctatgataggcttgatcttgctcattggtatggtg
ggtaaaaacgccacgcttttaattgatgtagcgaatgaagagcgtaaaaaaggtttgaat
atccaagaagccattttgtttgccggcaaaacccgtctgagaccgattttaatgacgacc
attgcgatggtttgtggcatgctgcctttagcgttggcgagtggggatggagcggcgatg
aaatcccctatagggattgcgatgagtgggggcttgatgatttctatggtgttaagctta
ctcattgtgccggtgttttatcgccttctcgctcccatagacgacaaaatcaagcggttt
tatcaaaaccaaaaaactttagaatga
DBGET
integrated database retrieval system
