KEGG   Hydrogenophaga pseudoflava: HPF_09425
Entry
HPF_09425         CDS       T06073                                 
Symbol
ycfD
Name
(GenBank) 50S ribosomal protein L16 arginine hydroxylase
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
hpse  Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpse03009]
    HPF_09425 (ycfD)
Enzymes [BR:hpse01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     HPF_09425 (ycfD)
Ribosome biogenesis [BR:hpse03009]
 Prokaryotic type
  ribosomal protein modification factors
   HPF_09425 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_8 AraC_binding
Other DBs
NCBI-ProteinID: QBM27906
UniProt: A0A4P6X029
LinkDB
Position
1939929..1941101
AA seq 390 aa
MTPHTDSIAGAPSVDLPAQMLGGMSPARFMQRYWQKKPLLIRNAFPGFQPLLTRPELFAL
AAQESVESRLIVHKPAGWQLRHGPFARTVFPPLKQKRWTLLVQGVDLHLDAAHDLLGRFR
FVPDARLDDLMISWASDGGGVGPHFDSYDVFLLQASGQRLWRIGRQKDLSLEPDVPLKIL
SNFEPEQEHLLNPGDMLYLPPRWAHDGIAVGDDCMTYSAGFRVPQRGGLAGELLQRMADE
FEDSTLYRDPGQEATDHPAAMPASLEAFAADALQRMLAERTSLACALGEVMTEPKPRVWF
EEPVGPWQPGTALRLDRRTRMMYDSRHLFINGESFRAAGADARLMRVLADQRRLGAAQVR
RASADAQALLKDWFEAGWLHAESTAGGEKD
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgacaccacacaccgattccatcgcaggcgctccttctgtggacctgccggcgcagatg
ctgggcggcatgtcgccggcccggttcatgcagcgctactggcagaaaaagcccttgctg
atccgcaatgccttccccggtttccagcccctgctcacacgccccgagctgtttgcgctg
gccgcgcaggaatcggtcgagtcccgcctgatcgtgcacaagccggccgggtggcagctc
cggcacggtccctttgcccgcacggtctttccgcccctgaaacagaagcgctggaccctg
ctggtgcagggggtggaccttcacctggacgcggcgcacgatctgctgggccggttccgt
tttgtgcccgacgcgcgcctggacgacctgatgatttcctgggccagcgatggcggtggt
gtagggccccatttcgacagttacgacgtattcctgctgcaggccagcggccagcgtctg
tggcgcatcgggcggcaaaaggacctgtcgctggagcctgatgttccgctcaagatactg
agcaacttcgagcccgagcaggagcacctgctcaaccccggagacatgctgtacctgccg
ccgcgctgggcacacgacggcattgccgtcggcgacgactgcatgacctactcggcggga
ttccgcgtgccccagcgcggagggctcgccggcgaactgctccaacgcatggccgacgag
ttcgaggacagcacgctgtaccgcgaccccgggcaggaggccaccgaccacccggccgcg
atgccggcctcgctggaggcattcgcggccgatgccctgcagcgcatgctcgccgagcgc
acttcgctggcctgcgccctcggcgaagtgatgaccgagcccaagccccgtgtgtggttc
gaagagcccgtgggcccatggcagcctgggacggcgttgcgcctggaccggcgcacccgc
atgatgtacgactcaaggcacctgttcatcaacggagagagttttcgggccgctggagcc
gacgcccgcctcatgcgcgtcctggcagatcaacgtcgcctgggtgcggcgcaggtgcgc
cgtgccagcgccgacgctcaggccctgttgaaggactggttcgaggccggctggctccat
gcggagtccacggcgggtggtgaaaaggactga

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