Hydrogenophaga pseudoflava: HPF_10175
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Entry
HPF_10175 CDS
T06073
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF_10175 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_10175 (nth)
Enzymes [BR:
hpse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HPF_10175 (nth)
DNA repair and recombination proteins [BR:
hpse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF_10175 (nth)
Prokaryotic type
HPF_10175 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QBM28054
UniProt:
A0A4P6X304
LinkDB
All DBs
Position
complement(2090733..2091368)
Genome browser
AA seq
211 aa
AA seq
DB search
MTPAQIETFFATLQAANPQPVTELEYTSVFELLAAVLLSAQATDVGVNKATRRLFPVAHT
PQQILDLGLEGLESYIKTIGLYRSKAKHLMETCRILVERHGGQVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVGNRTGLAPGKTPLAVEQQLLRRIPARYLVDAHHWLI
LHGRYVCQARKPLCHQCAVSACCDFRPKTTG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgcgcagatcgagacattcttcgccaccctccaggccgccaacccgcaaccc
gtcaccgaactcgaatacaccagcgtgttcgagctgctggccgccgtgttgctctcggcg
caggccacggacgtgggcgtcaacaaggccacgcgccggctcttcccggtggcgcacacg
ccgcagcagatcctggacctgggccttgaagggctggagtcgtatatcaagaccatcggc
ctgtaccgcagcaaagcgaaacacctgatggagacctgccgcatcctggtggaacgccac
ggcggccaggtgccgcgcacgcgcgaggcactcgaagccctgcccggcgtgggccgcaag
acggcgaacgtggtgctcaacgtggccttcggcgaaccgaccatggcggtggacacacac
atcttccgcgtcggcaaccgcaccggcctggcgccaggcaagacgccgctggcggtggag
cagcagctgctcagacgcatcccggccaggtacctggtggacgcccaccactggctgatc
ctgcacgggcgctatgtctgccaggcgcgcaagccgctgtgccaccagtgcgccgtgtcg
gcctgctgcgacttcagacccaagacgacgggctga
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