KEGG   Hydrogenophaga pseudoflava: HPF_16005
Entry
HPF_16005         CDS       T06073                                 
Name
(GenBank) CRISPR-associated protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
hpse  Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpse02048]
    HPF_16005
Prokaryotic defense system [BR:hpse02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    HPF_16005
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: QBM29197
UniProt: A0A4P6WZF2
LinkDB
Position
complement(3352496..3353230)
AA seq 244 aa
MARHLLIRLSSPLIAFGGETIDNFGVIRDFPALSMVTGLIANALGWDRGDDVLHNRLQER
LLVGTRLETQAQKLREYQTAELFEDDAGWTTFGQPEGRAKSPSYSMEKNGRKSLTLQRYR
DYHADLTALLALRLDPADESPTLEEIAQAMDRPQRPLFIGRKPCLPVGRLVAGWIDADTV
LQALQLAPLASGQDGLRAQWPDGEGQLPGDRLVDVCDERNWTSGVHGGWRPVREGLIRYA
GNMS
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcgcgccatctgctgatcaggttgtcgtccccactcatagcgtttgggggcgaaacc
atcgacaacttcggtgtcattcgtgacttcccggcgctctccatggtcactgggctgatt
gccaatgccttgggctgggatcggggcgacgacgtgttgcacaaccggctgcaagagcgg
ttgctagtgggtacccgactggagacgcaagcgcagaagctgcgggaatatcaaacagca
gagctatttgaagatgacgccggctggacgacttttgggcaaccagaggggcgagcaaag
agccctagctattcgatggaaaagaatgggcggaagtccctaacattgcagcggtaccgc
gactaccacgccgacctcacggcccttcttgccttgcggcttgatcctgctgacgagtcg
cccacgctggaggaaatagcccaagcgatggaccgaccccagcgtcctcttttcatcggg
cgcaaaccttgtttgcccgtgggtcggttggtggccggatggattgacgccgatacggtt
ttgcaagccctgcaacttgcgccattggccagtgggcaagatggtttgcgagcccagtgg
ccagatggcgaagggcaactaccgggtgaccgtttggtggatgtgtgcgatgaacgcaac
tggaccagtggcgtccacggcggctggcgtcccgtgcgcgaagggctcatccgatacgca
ggaaacatgtcatga

DBGET integrated database retrieval system