KEGG   PATHWAY: hpum00195
Entry
hpum00195                   Pathway                                
Name
Photosynthesis - Henckelia pumila
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
hpum00195  Photosynthesis
hpum00195

Module
hpum_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:hpum00195]
hpum_M00161  Photosystem II [PATH:hpum00195]
Organism
Henckelia pumila [GN:hpum]
Gene
140865063  [KO:K02115]
140867210  [KO:K08901]
140867776  [KO:K02695]
140873660  [KO:K02639]
140874760  [KO:K02692]
140874793  [KO:K02113]
140875119  [KO:K08905]
140879655  [KO:K02641] [EC:1.18.1.2]
140879656  [KO:K02698]
140880309  [KO:K02701]
140880851  [KO:K02716]
140881232  [KO:K02641] [EC:1.18.1.2]
140881423  [KO:K03542]
140886571  [KO:K02641] [EC:1.18.1.2]
140886800  [KO:K02701]
140889803  [KO:K02115]
140891280  [KO:K02694]
140891488  [KO:K03541]
140892459  [KO:K02108]
140892909  [KO:K02699]
73952612  psbA; photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
73952617  psbK; photosystem II subunit K [KO:K02712]
73952618  psbI; photosystem II subunit I [KO:K02710]
73952621  atpA; CF1 subunit alpha [KO:K02111] [EC:7.1.2.2 7.2.2.1]
73952622  atpF; CF0 subunit I [KO:K02109]
73952623  atpH; CF0 subunit III [KO:K02110]
73952624  atpI; CF0 subunit IV [KO:K02108]
73952630  petN; cytochrome b6/f subunit N [KO:K03689]
73952631  psbM; photosystem II subunit M [KO:K02714]
73952636  psbD; photosystem II protein D2 [KO:K02706] [EC:1.10.3.9]
73952637  psbC; photosystem II 43 kDa protein [KO:K02705]
73952639  psbZ; photosystem II subunit Z [KO:K02724]
73952643  psaB; photosystem I P700 apoprotein A2 [KO:K02690] [EC:1.97.1.12]
73952644  psaA; photosystem I P700 apoprotein A1 [KO:K02689] [EC:1.97.1.12]
73952656  atpE; CF1 subunit epsilon [KO:K02114]
73952657  atpB; CF1 subunit beta [KO:K02112] [EC:7.1.2.2 7.2.2.1]
73952660  psaI; photosystem I subunit I [KO:K02696]
73952663  petA; cytochrome f [KO:K02634]
73952664  psbJ; photosystem II subunit J [KO:K02711]
73952665  psbL; photosystem II subunit L [KO:K02713]
73952666  psbF; cytochrome b559 subunit beta [KO:K02708]
73952667  psbE; cytochrome b559 subunit alpha [KO:K02707]
73952669  petG; cytochrome b6/f subunit G [KO:K02640]
73952672  psaJ; photosystem I subunit J [KO:K02697]
73952678  psbB; photosystem II 47 kDa protein [KO:K02704]
73952679  psbT; photosystem II subunit T [KO:K02718]
73952681  psbH; photosystem II subunit H [KO:K02709]
73952682  petB; cytochrome b6 [KO:K02635]
73952683  petD; cytochrome b6/f subunit IV [KO:K02637]
73952717  psaC; photosystem I subunit C [KO:K02691] [EC:1.97.1.12]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
hpum00196  Photosynthesis - antenna proteins
hpum00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   

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