KEGG   Henckelia pumila: 140866829
Entry
140866829         CDS       T11037                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
hpum  Henckelia pumila
Pathway
hpum03018  RNA degradation
hpum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140866829
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140866829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpum03019]
    140866829
   03041 Spliceosome [BR:hpum03041]
    140866829
Messenger RNA biogenesis [BR:hpum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140866829
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     140866829
Spliceosome [BR:hpum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    140866829
 Complex C
  U2 snRNP components
    140866829
SSDB
Motif
Pfam: LSM TIG_SUH U6-snRNA_bdg
Other DBs
NCBI-GeneID: 140866829
NCBI-ProteinID: XP_073127984
LinkDB
Position
4:138567712..138569702
AA seq 97 aa
MGSEEEITVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTTRRMVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggggagcgaagaggagattacagtgaaggagccattggacctcattcgtctcagtctc
gacgagcgcatctacgtcaaacttcgccacgatcgcgagcttcgcggcaagcttcatgcc
tatgatcagcatttaaatatgattctgggagatgttgaagagattgttactactgtggag
atcgatgatgaaacatatgaggaaattgtgaggacaaccaggcgtatggtaccatttcta
tttgtcagaggagacggtgtcattttggtttcgcctccactgcgaacagcctga

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