Henckelia pumila: 140889996
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Entry
140889996 CDS
T11037
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hpum Henckelia pumila
Pathway
hpum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140889996
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpum01007
]
140889996
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpum03016
]
140889996
Enzymes [BR:
hpum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
140889996
Amino acid related enzymes [BR:
hpum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
140889996
Transfer RNA biogenesis [BR:
hpum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
140889996
Prokaryotic type
Other AARSs
140889996
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
140889996
NCBI-ProteinID:
XP_073153843
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Position
3:41992591..41998619
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AA seq
1183 aa
AA seq
DB search
MDDVCEGKDFSFPAQEEKILALWDEIKAFETQLERTKDFPEYVFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHDIDQKLGIKSREDVIRMGIGNYNEE
CRGIVQRYVSEWEKTVVRMGRWIDFRNDYKTMDLNFMETVWWTFAQLYQKGLVYRGFKVM
PYSTGCKTPLSNFEANSNYKEVPDPEIMVSFPIIDDSDGACFVAWTTTPWTLPSNLALCV
NANLVYVKVRNKFNGKVYVVAESRLAELPFEKAKKGLPDGVVGVSENSNPKAKSAGAKTK
NVDTYEMLDKCTGASLVGKKYIPLFDYFKDFSHVAFRVVADDYVTNDSGTGIVHCAPAFG
EDDYRVCMQNDIISKGENLIVAVDDDGCFTERITDFSRRYVKDADKDIIQAVKSKDRLVK
SGSFTHSYPFCWRSDTPLIYRAVPSWFVAVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPIWISDDSEEIVVMDSIEKLEKLSGAKVTDLHRHKIDHITIP
SSRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGW
FYTLMVLSTAIFGKPAFKNLICNGLVLAEDGKKMSKRLKNYPAPSEVIDDYGADALRLYI
INSPVVRAEPLRFKKDGVYGVVKDVFLPWYNAYRFLLQNAKRLEVEGLAPFAPIDQQILQ
QSSNVLDQWINSATHSLVHFVRQEMDAYRLYTVVPYLLKFLDTLTNIYVRFNRKRLKGRT
GEEDCRTALSTLYHVLLTACKSMAPFTPFFTEVLYQNLRKVTNGSEESIHYCKFPEVEGK
RGDRIEESVNRMMTIIDLARNIRERHNKPLKAPLREMVIVHPDTEFLDDITGKLREYVLE
ELNVKSLVPCNDTLKYASLCAEPDFSVLGKRLGKSMGIVAKEVKSMATENILALEKAGEV
TIATHVLKLSDIKITRKFRYPDNVKEEEMDAAGDGDVLVVLDLRGDDSLFEAGVAREVVN
RIQKLRKKIGLEPTDIVEVFYKSLDNDKTVLQEILKSQEQYIREVLGSSLLPSDLLPPGA
LILTEESFHGISNLSFTIILTRPTLVFNSDAISALYAGSTKFARGLQAYLLMRDYNNLRG
EFQLGKGMINVNCIEGQPPVDVLVGEHVFLSFGDYISSTRRTQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtttgtgaaggaaaagacttctccttccccgcacaggaggagaaaatactt
gcactgtgggatgaaattaaggcgttcgaaactcagctcgagcggaccaaggatttcccc
gaatacgtcttctacgacggcccgcctttcgccaccggtcttccgcactacggtcatatt
ttggctggcacgatcaaagacattgtgacacgttatcagtctatgactggtcatcacgtg
acccggcgattcggctgggattgccatggtttgcctgtggagcatgatatcgatcagaag
ttagggattaagagtagagaggatgtgattcggatgggtattgggaattacaatgaagag
tgtaggggaattgtgcagaggtatgttagtgagtgggagaaaacggtggttaggatgggg
cggtggattgattttaggaacgattataagacaatggatttgaatttcatggaaactgtg
tggtggacttttgcgcagctgtatcagaaaggtcttgtatatagaggttttaaggtgatg
ccatacagtacaggttgcaaaactccattgtctaattttgaagccaattccaactacaag
gaagtcccagatcctgaaataatggtatcctttccaataattgatgattcagatggtgca
tgttttgtggcatggaccacaactccttggactttacctagcaaccttgcactttgcgtc
aatgccaatcttgtgtacgtgaaggtccgcaacaagttcaatggaaaagtttatgtggtt
gcagaatctcgattggcagagcttcctttcgaaaaggcaaaaaaaggattacctgatgga
gttgttggtgtttctgaaaattcaaacccaaaggccaaatctgctggcgcaaaaacaaag
aatgttgatacttatgaaatgttggataagtgtactggagcttcacttgttggaaagaaa
tatatcccattgtttgattatttcaaggatttctctcatgtggcattcagagttgttgca
gatgactatgtaactaatgatagtggtactggaattgtccactgtgctcctgcatttggt
gaagatgattaccgtgtttgtatgcagaatgacataattagcaagggggagaaccttatt
gttgcagtggatgatgatggttgtttcactgagagaatcactgacttcagcaggcgatat
gtaaaggatgcagataaagatattattcaagcagtgaagtcgaaagacaggcttgtcaaa
tctggaagctttactcatagttatcctttttgttggagatcagacactcctctgatctac
agagctgtacccagctggtttgttgctgtggagaagataaaggatcaattgcttgagaac
aacaaacagacatactgggtccctgattttgtgaaggaaaaacgctttcataattggcta
gaaaatgctcgagattgggctgtcagtcgaagtaggttttggggtactccgcttcctata
tggatcagtgatgatagtgaggagattgtggtcatggattccatcgaaaaacttgaaaaa
ctttctggtgctaaggtgacagacttgcatcgtcataaaattgaccatatcactatccct
tcaagtcgaggacctgaatttggtgtccttcgacgagtcgaggatgtgtttgattgctgg
tttgagagcggatccatgccttatgcttatatccattatccattcgaaaatgttgaatta
tttgagaaaaatttccctggacatttcgtggctgaggggctagatcaaactcgtggatgg
ttctatactctcatggttctgtcgactgcaatttttggaaaaccagctttcaaaaatctc
atttgtaatgggcttgtactggctgaggacgggaagaagatgagtaagagattgaagaat
tatcctgcaccatcagaagtcatagatgattatggagctgatgcattgagactgtacatt
attaactccccggttgttcgtgctgaacctttgcgctttaaaaaggatggagtttatggg
gtggtaaaagatgtcttcttgccatggtataatgcctataggttccttctgcaaaatgct
aaaagacttgaagttgaaggacttgcaccatttgcacccattgaccaacaaattcttcag
cagtcatccaatgtactcgaccaatggattaactcagcaacacatagtttggttcacttt
gtgcggcaagaaatggatgcttataggctttacacagttgttccttatctacttaagttt
ttggacaccttgacaaatatttatgtgcgatttaatcgaaaaagactgaaaggtcgcaca
ggagaagaggattgcagaactgctctttctactctttatcatgtacttctaactgcatgt
aaatcaatggctccattcacaccattcttcactgaagttctgtatcagaacttgaggaaa
gttaccaatggttcagaagagagcattcactattgcaaatttccagaagtagaaggcaaa
agaggggatcgtattgaagaaagtgtcaatcggatgatgacaataatagatcttgcacgc
aacattcgtgagcgtcacaacaaacctcttaaagcaccgctgagggagatggtgattgtg
catcctgatacagaatttcttgatgatattacgggcaaattaagagaatatgttctcgaa
gaacttaatgtgaagtctttagtcccatgcaacgacactttgaagtatgcttccttgtgt
gcagaacctgattttagtgtgttgggaaaaaggctaggaaaatcgatgggaattgttgcg
aaagaggtgaagtcgatggcaactgaaaatatcttagctttggagaaagcaggagaggtt
actattgccacacatgtcttgaagcttagtgatatcaagataacaaggaagttcaggtat
cctgataatgtgaaagaagaggaaatggacgcagctggtgatggtgatgttttggttgta
ttggacttgcgtggggacgattcgctgttcgaggctggagttgctcgagaagttgtaaat
cgcattcaaaagctgcgaaagaaaattggccttgaacctactgacatagtagaggtcttc
tataaatcactggacaatgataaaacagttttgcaagaaatactaaaatctcaggaacaa
tacattcgggaggtgctcgggtcttccttgttaccatctgatctactcccacctggtgca
ttgattcttaccgaagagagttttcatgggatttcaaatctctccttcactattatcttg
actagacctactttagtattcaactctgatgccatttctgcattatatgctggcagtacc
aagtttgcacggggattgcaagcttatttgctgatgcgagattacaataatctgagagga
gagtttcaactaggaaagggtatgattaatgtcaactgcatcgaaggtcaacctccggtc
gatgtgctggtcggagaacatgtgtttttgagctttggtgattatatctcgagcactagg
agaactcagtga
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