Helicobacter pylori OK113: HPOK113_0601
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Entry
HPOK113_0601 CDS
T02510
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOK113_0601 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyo03400
]
HPOK113_0601 (nth)
Enzymes [BR:
hpyo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HPOK113_0601 (nth)
DNA repair and recombination proteins [BR:
hpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOK113_0601 (nth)
Prokaryotic type
HPOK113_0601 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
IZUMO
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BAM96509
LinkDB
All DBs
Position
complement(632021..632671)
Genome browser
AA seq
216 aa
AA seq
DB search
MGLKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKL
FEKYPSVKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSL
DGVGQKTANVVLSVCFGANYIAVDTHVFRTTHRLGLSDANTPIKTEEELSDLFKDNLSKL
HHALILFGRYTCKAKNPLCGECFLKEFCVSKASFKA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaaacgcgctaaaacttaccaaaaagcccaacaaatcaaagaattgctttta
aaacattaccccaaccaaaccaccgaattgcaccataaaaacccctatgaattgctggtg
gctaccattttaagcgctcaatgcacggacgctagagtgaataaaataacgcccaagtta
tttgaaaaatacccaagcgtgaaggatttagcgctcgcttctttagaagaagttaaagaa
atcatcaaatccgtttcttatttcaacaataaaagcaagcatttaatcagtatggcacaa
aaagtggttagggattttaagggcgttatcccctctacgcaaaaagaattgatgagccta
gatggcgtggggcaaaaaaccgctaatgtggtgctttcagtgtgctttggtgcaaattat
atagccgtagatacccatgtgttccgcacgacgcaccgcttaggcttaagcgacgctaac
acgcccattaaaaccgaagaagaactcagcgatctttttaaagacaacctatccaaactc
caccatgccttaatcttgtttggccgctacacctgcaaggctaaaaaccccttatgcggt
gagtgttttttaaaagaattttgcgtttctaaggctagctttaaagcgtag
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