Helicobacter pylori SouthAfrica20: HPSA20_0628
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Entry
HPSA20_0628 CDS
T02807
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys01501
beta-Lactam resistance
hpys01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPSA20_0628
01503 Cationic antimicrobial peptide (CAMP) resistance
HPSA20_0628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpys03036
]
HPSA20_0628
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpys02000
]
HPSA20_0628
01504 Antimicrobial resistance genes [BR:
hpys01504
]
HPSA20_0628
Chromosome and associated proteins [BR:
hpys03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HPSA20_0628
Transporters [BR:
hpys02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HPSA20_0628
Antimicrobial resistance genes [BR:
hpys01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HPSA20_0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
PYNP_C
DUF3978
Bet_v_1
Motif
Other DBs
NCBI-ProteinID:
AGT73866
UniProt:
T1U8Z7
LinkDB
All DBs
Position
573934..574638
Genome browser
AA seq
234 aa
AA seq
DB search
MIRKILIGFFLSLLSLEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDV
LLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDKNTLEGYEFTYKRLESDYAYSI
AVLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSHARKLVIEFDSKYINAVKVGD
IYTYSIDGDPNKHEIKITKIYPTVDENTRKVSAEALLPNNMAVGLFGDGFIQTK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaaaattttaatagggttttttttaagtcttttgagtttggaagctggcgaa
aaagtgtatgcgattttcaacgtgaaagcgatgcaagattctaagctcaccttagatagc
acagggattgtggatagcattaaggttactgaggggagcgtggtcaaaaagggcgatgtc
ttgttgcttttgtataaccaagacaagcaagcccaaagcgattctaccgagcaacagctt
attttcgctaaaaagcaataccaacgatacagcaaaattgggggcgcggtggataaaaac
actctagagggttatgaatttacttataaacgcttggagtctgattacgcttattctatt
gcggtgttgaacaaaaccattttaagagccccttttgatggcgtgatagcgagcaaaaac
attcaagtgggcgaaggggtgagcgctaacagcacggtgttactgagattagtcagccat
gccaggaaattagtcattgaatttgattccaaatacattaatgcggtcaaagtgggggat
atttacacttattctatagatggggatcccaataaacatgaaattaaaatcactaagatt
tatcccaccgttgatgaaaacacacgaaaagtgagcgctgaagcccttttgcctaataac
atggcagtggggctttttggcgatgggtttatccaaacgaaataa
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