Herbaspirillum rubrisubalbicans: Hrubri_1171
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Entry
Hrubri_1171 CDS
T04238
Name
(GenBank) multidrug efflux system transporter AcrA-like protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb01501
beta-Lactam resistance
hrb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hrubri_1171
01503 Cationic antimicrobial peptide (CAMP) resistance
Hrubri_1171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrb03036
]
Hrubri_1171
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_1171
01504 Antimicrobial resistance genes [BR:
hrb01504
]
Hrubri_1171
Chromosome and associated proteins [BR:
hrb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Hrubri_1171
Transporters [BR:
hrb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Hrubri_1171
Antimicrobial resistance genes [BR:
hrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hrubri_1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
YknX_C
BSH_CusB
Beta-barrel_RND_2
HH_CzcB
HH_YBHG
HH_EMRA
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
ALU88383
LinkDB
All DBs
Position
1370756..1371946
Genome browser
AA seq
396 aa
AA seq
DB search
MRTSLILRPVAAVAILSVLSACGKPPGGPPPAAGTPVLGVVTVRTQPVELHTELPGRTSP
YQIADVRPQVGGIIKSRSFREGSDVKAGQMLYQIDPASYRAAYDSSVAALAKAEASVKTA
RLKAQRYKELVAIKAVSQQDYDDAVASLGEAEADVGSARANVQTSRINLDYARVDAPISG
RISKSSVTPGALVTASQTTALTTIQQLDPIYVDVTQSSTNWLDLKEALAKGQLQKSGNGA
KVRLILENGRTYAEEGRLQFSDVTVNQDTGAITLRAVFPNPKADLLPGMYVRAVLEEGVR
QQGLLVPQQAVSRDGAGKPQAFVVNAQGVVEQRALVTDRAIGDQWLVSSGLKEGDQLVVD
GQQQATPGAKVKVVPWSPKATVTNASASAATSAATH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttccctcatcctaaggcccgtcgccgcagtggccatcctcagtgttctcagt
gcctgcggcaagccgccgggtgggccgccaccggccgcaggtacgccggtgctgggtgtc
gtgacggtgcgcacacaaccggtggagttgcataccgagctgcctggccgtacctcgccc
taccagatcgccgatgtgcgccctcaggttggcggcatcatcaagtcgcgtagtttccgc
gaggggagcgatgtcaaggccgggcagatgctgtatcagatcgatccggccagctaccgg
gccgcctatgacagcagcgtggcggccctggccaaggccgaggccagcgtcaagacggcg
cgtctgaaggcgcaacgctacaaggaactggtggccatcaaggccgtcagtcagcaggat
tacgacgatgccgtggcttccttgggcgaggccgaggctgatgtcggttcggcccgtgcc
aacgtgcagaccagccgcatcaacctggactatgcccgcgtcgatgcccccatctccggg
cgtatcagcaagtccagcgtgaccccgggggcactggtgacggccagccagaccactgcg
ctgaccaccattcagcaactcgaccccatctacgtggacgtgacccagtccagcaccaat
tggctggatctgaaggaagccctggccaagggccaactgcagaagtccggcaacggcgcc
aaggtcaggttgatcctggaaaacggccgcacttatgccgaggaaggccggctgcaattc
tccgacgtgacggtcaaccaggataccggcgcaatcaccctgcgcgcggtcttccccaat
cccaaggccgacctgctgccggggatgtatgtacgtgcagtgttggaggagggcgtgcgc
cagcagggcttgctggtgccgcaacaggcggtgagccgggatggcgccggcaagccgcag
gccttcgtggtcaatgcgcagggcgtggtggaacagcgcgcgctggtgaccgatcgcgcc
attggcgaccagtggctggtgagcagcggcttgaaggagggcgatcaactggtggtcgat
ggccagcagcaggccacccccggtgccaaggtgaaggtggtgccatggtcgcccaaggcc
acggtgaccaacgccagcgccagcgccgccaccagcgccgcgacccactga
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