Halobaculum roseum: K6T36_13790
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Entry
K6T36_13790 CDS
T07547
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hre
Halobaculum roseum
Pathway
hre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6T36_13790 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hre03400
]
K6T36_13790 (nth)
Enzymes [BR:
hre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K6T36_13790 (nth)
DNA repair and recombination proteins [BR:
hre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6T36_13790 (nth)
Prokaryotic type
K6T36_13790 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QZY02354
LinkDB
All DBs
Position
2708516..2709199
Genome browser
AA seq
227 aa
AA seq
DB search
MGTPLDSREAQVGEVLDRLYEEYPDTDISLNFSTELELLVAVVLSAQCTDERVNEVCEDL
FEKYRTPEDYAEASEEELADDIYGITFHNNKAGYLKGIGEILVEEHGGEVPDTMSELTDL
PGVGRKTANVVLQHAHDVTEGIVVDTHVQRISRRLGITEEERPGAIETDLMGVVPEDDWR
MFTHLLISHGRATCTARNPDCDECVLADVCPSERGSAAVDLASGEAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgccgctggactcccgggaggcgcaggtcggcgaggtgctcgaccgcctctac
gaggagtaccccgacacggacatctcgctgaacttctcgaccgagttggagctgctcgtc
gcggtcgtcctctcggcgcagtgcaccgacgagcgggtcaacgaggtctgcgaggacctc
ttcgagaagtaccgcacgccggaggactacgccgaggccagcgaggaggaactcgccgac
gacatctacggcatcaccttccacaacaacaaggccggctacctgaaggggatcggcgag
atcctcgtcgaggaacacggcggcgaggtgccggacacgatgagcgagctgaccgacctc
cccggcgtcgggcgcaagaccgcgaacgtcgtgctccagcacgcccacgacgtgaccgag
gggatcgtcgtcgacacgcacgtccagcgcatctcccgacgcctcgggatcaccgaggag
gagcgccccggggcgatcgagacggacctgatgggcgtggtccccgaggacgactggcgg
atgttcacccacctgttgatcagccacgggcgggcgacgtgtacggcgcggaaccccgac
tgcgacgagtgtgtgctcgcggacgtctgtccgtccgagcgggggagcgcggccgtggac
ctcgccagcggcgaggcgtggtaa
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integrated database retrieval system
