Haliotis rufescens (red abalone): 124110410
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Entry
124110410 CDS
T07893
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hrf04054
]
124110410
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124110410
Pattern recognition receptors [BR:
hrf04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124110410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
DEAD
ResIII
RIG-I_C
Helicase_C
CARD_2
Yippee-Mis18
AAA_22
AAA_25
PhoH
EFR3_ARM
DUF1631
IstB_IS21
AAA_19
Motif
Other DBs
NCBI-GeneID:
124110410
NCBI-ProteinID:
XP_046325718
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MAEAALEVPVRSASVNNTAFLVESVDIYREMIIRKVRCGSFIGHMCFPASFQKTIRDILE
NENQDQQMKATTIFLDYLKERRDPRDYVLFMQLLEQNGYDALAEFLKGETDLHKDGEHMR
LMKFFVEDISNRIDVEALYPCLVQGNWLDKEDGQRLRNIATTTGRIPAARWLVLMILPRR
KKNWLKQFLQLLRDNGFDELVEWIEGDVSYPGSADGCDSSEYETRSDDTVSMNNLSASGA
AYSLKNNLDLIPDEDETKRPFTYLEKTGPRRGDVLGLPLKDLRMVDKWVEKTLDIPRDID
DVSLVSSIEENALQDLNDHDFVSHELMETRANVFKPLENRPYQDELVNAVADGSNAIIIA
PTGCGKTVVALRIMQEHLQKMQGRGKVAFFANEVTLVDQQHDMCKGHIEESVKTGMIVGE
TKDKSKIPLGDLIRQTDILFMTPQIIVDAIADKAIDSLSIFTLLVFDECHHVLSKHPTSK
IMAIYIDRKLEGVTRLPQVVGLTASVGVGKKKEATLKRGATTHIKTLCSTMDATGGLVTV
RKNKENLDEHTYFVETAIKKTNERSSDPFKQCVVGIMMKIEERMSSHESELGIETEDEPL
GGKFKPYAVRGTMQYHQWLYKLYYTVIPSIRNIDFRRSYITCVQHLVIYNNALFINEHCR
ALDGMLVIEKAFRDPLPNVGCNTEIWLNRLYTENWQKLEAESRTHVILNPRLILLKLEVL
NQVCKKPTSRILILVKLRTLARALCRVLTEMAETKHLNPVIVTGCGAPGDKGGMTRPRQI
EAVKSFKWGPSRVAVATSVAEEGIDITTCSLVIRYEYVSNEIGMIQARGRASRVEDGTYC
LITGNSTLATREETNAQLEIVMNEAVDALQNEFDQDPITFRQSIEEIQRKQKLEREQNEQ
SSKKRPKNLATFRLHCYKCTVYICESSDIRVVNSAHHMVMAPSIGKLITVKDNKKPVEFD
GLKKYCKIHCKKCDLDWGVGMVYKDVKLVVLSMKGVMAYDRRGNQHHRKSWKDAPFDCSA
MTERDMLNYTESF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggcattggaggtccctgtacgtagtgccagtgtaaacaacacagccttt
ctggtggagagtgttgatatatatcgggaaatgatcataaggaaggttcgatgtggttca
ttcatcggacatatgtgttttcctgcaagttttcagaagacaatccgagacatactggaa
aatgaaaatcaggatcaacagatgaaagctacgacaatattcctggactacctcaaggaa
cggagagatccccgggactatgtgctgttcatgcaactgctggaacagaatggttatgat
gctttagcagaattcctgaagggggaaacggatcttcataaagacggagaacacatgaga
ctgatgaaattctttgttgaggacatcagtaatagaattgatgtagaagctctctatcca
tgtctcgttcagggcaactggttggataaagaagacggacagcgcctgagaaacatagcg
acaacaacaggcaggatccctgctgccaggtggctggttctgatgattcttcctcgccgg
aagaagaactggctcaagcaatttctgcagcttcttcgggataatggttttgacgaactg
gttgaatggatcgaaggagatgtcagttatccaggttccgctgacggttgcgattcatct
gaatacgaaacaagaagtgatgacacagtgtcaatgaataacttgtcagcttcaggtgcc
gcttacagcttgaaaaataatttggatctaatcccagatgaagatgaaacaaaacgtcca
tttacatatcttgaaaagacagggcctagacgtggtgacgttttaggactgcctcttaag
gacctacgcatggttgacaagtgggtggagaagactttagacattccaagagacattgac
gatgtgagtttggtatcaagtattgaggaaaacgcactacaagaccttaatgatcatgac
tttgtttcacatgaactaatggagacacgagctaacgtcttcaaacctctcgaaaaccga
ccataccaagacgagttggtcaatgcggtcgctgacgggagcaatgccatcattatagcg
cctacaggatgcggaaagacagtggtggctctcagaatcatgcaggagcaccttcagaag
atgcaaggtcgcgggaaagttgctttttttgccaatgaggtgacactggtagaccaacag
catgacatgtgtaagggacacattgaagagtcagtcaagacagggatgattgttggagag
acgaaggataagagcaaaataccccttggggatttaatcagacaaactgacatcctgttc
atgacgcctcagatcattgtagatgccatagcagacaaagccatcgactccttgtcgata
ttcacattgcttgtgtttgacgaatgtcaccacgtgctgtccaaacaccctaccagcaag
atcatggctatctacatcgaccggaaactggaaggagtgacacgtctgcctcaggtggtg
ggactgacagcatccgtcggagtagggaagaagaaagaagccaccttaaagagaggggct
actactcacatcaaaaccttatgttctaccatggatgcgacaggaggcttggtgacagtc
aggaagaacaaggagaatcttgatgaacacacctatttcgtggagacagctatcaagaaa
acaaatgaacgatcatccgacccctttaagcaatgcgtagttggcatcatgatgaagatt
gaagaaagaatgtcaagtcatgagtccgagcttggaattgaaacagaggatgaacctctt
ggtggcaagttcaagccatacgcagtcagagggacaatgcagtatcaccagtggctctat
aagctgtactacacagttattcccagcataagaaatatcgacttccgtcgctcgtatatc
acgtgtgtgcagcatctggtcatctataacaatgcgttattcatcaacgaacattgccga
gccctcgatggaatgcttgtcattgagaaggcctttcgtgaccctctaccaaatgtcgga
tgcaacacagagatttggcttaacagactttatactgaaaattggcagaagcttgaagca
gaatcgagaacccatgtcatcctgaacccacgactcatcttactgaagttggaagtgttg
aatcaagtctgtaaaaaacccacttccaggattttgattcttgtgaaattgcgtactctc
gctagagccctctgtcgagtgttgactgagatggcggagaccaaacacctgaacccagtg
attgtgaccgggtgtggagcaccgggtgataaaggaggtatgacccggcctcggcagatt
gaagctgttaaaagtttcaagtggggcccgagtcgtgtggcagttgcgacttctgtggca
gaggaggggatagatatcaccacgtgcagcttggtcatcagatatgagtatgtgtccaat
gagataggcatgatccaagcaagaggtcgagcatcgcgagtcgaggacggcacctattgt
ctcattaccgggaactctacattggcgactagggaagaaaccaacgcccagttagagatc
gtcatgaacgaagctgttgatgcattacagaacgagttcgaccaagatcccatcactttc
cgacagtcgattgaggagattcaaaggaagcaaaaactggaaagagagcaaaatgaacaa
agttccaaaaagcgtccgaaaaaccttgcgacatttcgactacattgctacaaatgcact
gtatacatatgtgaatcttctgatattagagttgtcaactcggcacatcacatggtgatg
gcccccagcattggcaagttaattacagtgaaagacaataagaaacctgttgagtttgat
ggcttgaagaagtactgcaaaatccactgcaaaaagtgtgacctcgactggggtgttggc
atggtgtacaaggatgtcaagttggttgtgttatcaatgaaaggcgttatggcttacgac
agacgtggtaaccaacatcatcgcaaatcttggaaggatgcgccgtttgactgttcagca
atgacggaaagggatatgttgaattatacggaatccttttga
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integrated database retrieval system
