Haliotis rufescens (red abalone): 124115067
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Entry
124115067 CDS
T07893
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04120
Ubiquitin mediated proteolysis
hrf04140
Autophagy - animal
hrf04144
Endocytosis
hrf04517
IgSF CAM signaling
hrf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124115067
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124115067
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124115067
04140 Autophagy - animal
124115067
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124115067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124115067
04121 Ubiquitin system [BR:
hrf04121
]
124115067
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124115067
Membrane trafficking [BR:
hrf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124115067
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124115067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
TRAF3_RING
zf-C3HC4_4
zf-RING_UBOX
U-box
zf-C3HC4_3
zf-rbx1
zf-Nse
RING_XB3-XBAT31
Imm7
zf-RING_5
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
124115067
NCBI-ProteinID:
XP_046331859
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MDENEANLGQPSFPSGSDSASFGEVTSSGAGYCYQERTEGFDYDFVPTPDPKYECAICLL
ILREPRQTKCGHRFCRGCITKWLRECDVRCPVDNEAIDERELFADNFAKREILNFKVKCP
NSRQGCEVLATLKNVQEHTDQCALALVPCPNRCMDILLRRDIPNHVQFNCRRRILQCQNC
QKDVSAEGMEHHLTECPLVQVFCQYCGGDFIKQSLSGHHEKDCLDYPIACDFRPLGCSVQ
FKRKMEQEHYLDATVDHQRMLCHGVVTILHKFGIQSLSPASATAISSRLTPMEMSTSLSA
MGSYLSQFQGLNMQDPGLAPNISGSRTPDGQSVKQFNLDPLTTDFDPRKLHRSVSDTLLQ
PSNETAEGVHVSHTSKQSDADGVKGALSSLQGASGLDLQSLKNQNMYQDESLARHDQQLV
EIKAKNEMLEKTNKELKYKLRFLDNAVQEFEGRACNGQFYWRIKNYHKLREEAEQGINTA
LHSPSFYSNCYGYKLCIRANLNGVDAAKGSHLSIFIHFMQGDWDEILDWPFSGRIVLSVI
DQNPICELRNHIAETLIAKPNLAAFQKPVTPRNHKGFGYMEFVALSVLDNADFVRNDTLI
IKAQVIPAT
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatgaggctaatcttgggcagccgtcattcccgagtgggagcgatagcgcg
tcttttggagaggtgacatcgtcgggggcagggtattgctatcaagagcggacagagggc
tttgactatgactttgtaccaacccctgaccccaaatacgagtgcgccatctgcctgctt
atcctgcgagaacctcgacagaccaaatgtggtcacaggttctgccgtggctgcatcaca
aaatggctgagggagtgtgatgttcgatgtcctgttgacaatgaagcaatcgatgagcgg
gaattatttgcagacaactttgccaaacgtgaaatcctaaacttcaaagtcaaatgtccc
aactcaaggcaaggctgtgaggtgctggccacactcaagaatgttcaggaacatacagat
cagtgtgccttagccctagtcccatgtcccaatcggtgtatggacatactgctacgcaga
gatatcccaaatcatgtacagttcaactgccgtcgtagaattctacagtgccaaaattgt
cagaaggacgtcagtgctgaaggaatggagcatcatctgaccgagtgtccattggtgcag
gtgttctgtcagtactgtggtggagacttcatcaagcaatcacttagcggacatcatgag
aaggactgtcttgactatcccattgcctgtgactttagacctctcggatgttctgttcag
tttaaacgcaagatggagcaggaacactacctggacgccacagtcgaccatcaacgcatg
ctgtgtcatggcgtggtaaccatcctccacaaattcggcatccagagcctctctccagcc
tcggccacagccatatcaagcagactcaccccgatggagatgtccacgtcactgtcagcc
atgggcagttacctcagccagttccaaggcctcaacatgcaggatcccggtcttgccccg
aacatctccggttcacggaccccagatggacagtcggtcaaacagttcaaccttgatccc
ctgacaaccgactttgaccctcgtaagcttcaccgaagtgtgtccgatacactgttgcag
ccatccaacgagactgcagaaggagttcatgtaagtcacacctccaaacaatctgatgct
gatggtgtgaagggggccctgtcctcactgcagggggcttcgggactagacctccagagt
cttaaaaaccagaacatgtaccaagatgaaagtctggctcgtcatgaccagcaactggtt
gaaatcaaagcaaagaatgagatgttggagaaaacaaacaaggaactgaagtacaaactg
cgcttcctcgacaatgctgtgcaggagttcgaaggccgggcatgcaatggtcagttctac
tggaggatcaaaaattaccacaagctccgtgaggaggcggaacagggcatcaacaccgcg
ctgcacagcccttcattttattccaactgctatggttacaagttgtgtattagagctaac
ctcaatggtgtggacgcagccaaaggaagccatctttcaatcttcatacatttcatgcag
ggagattgggacgagattctcgactggccattttctggccggattgttctgtcagtgatt
gaccagaatcccatatgtgagctccgaaatcatatcgctgagactcttattgccaaaccc
aatttggcagcttttcaaaaaccggtcacgccaaggaaccacaaaggatttggttacatg
gaatttgtagccttaagtgtgctggataacgcagactttgttaggaatgatactcttatc
atcaaagctcaagttatcccagcaacgtaa
DBGET
integrated database retrieval system
