Haliotis rufescens (red abalone): 124116679
Help
Entry
124116679 CDS
T07893
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124116679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124116679
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124116679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP43_N
RRM_1
RRM_7
RL
Motif
Other DBs
NCBI-GeneID:
124116679
NCBI-ProteinID:
XP_046334067
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSQYIQVTEEENEEPIEIPSEDDGTLLLTTLSAQFPGACGMKYRNPETGAYRGIRLVDGR
LHPPDGLWESHVYVSVFPKENKRKGEEGQENPAAKTKRIETSPCSTDLIVLGLPWKSTED
DLKKYFAQFGELLLVQVKRDIKTGQSKGFGFIRFVEHSAQVKCMSQRHMIDGRWCDVTIP
NSKEGAQQLMNRKVFVGRCTENLSAENLRNYFGKFGEVVDVFIPKPFRAFAFVTFANPEI
AQTLCGEDHVIDGTSVHVSSAAPKNMDRHGDRKGGGGGYNQGFNQGFGNQGGWSPGPRPS
PSHQNNIGKQNSQNMAQGVDNQVANNIGMNLLNSAMMAAAQAVLSGQGQWGPLGLAGQGG
GGGGGGGGGGNGDTTPNQNNSNQTFGNIGGGGGQGGGSNFLGWGGPHSDGQSHSPASQGQ
YGGWGTHGSGGRSGGWS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtatattcaagttacggaggaggagaacgaggaacctattgaaattccaagt
gaagatgatggtaccctgttattgacgacactttctgcccagtttcctggagcatgtgga
atgaaatatcgcaatccagaaaccggcgcttatcgtggtatccgccttgtagatgggcgc
ctgcatccaccagatggtttatgggaatcccacgtctacgtttcggtgtttccaaaagaa
aacaaaaggaagggcgaagagggccaagagaacccagcagccaagacaaagcgaatcgag
acatcaccatgcagcacagatctcattgtccttggtctgccatggaagagtacagaagat
gacctaaagaaatatttcgcccagtttggagaactgcttttggtgcaggttaagcgagac
atcaagactggccagtccaaaggatttggtttcattcgatttgtggaacactcagctcaa
gtgaagtgcatgtcccagcgtcacatgatagatggcagatggtgcgatgtcaccataccc
aactcaaaggaaggtgctcagcagctcatgaacaggaaagtctttgtggggagatgtaca
gaaaacctgagtgctgaaaacttgcgaaactactttggcaagtttggtgaagttgtggac
gtcttcattccgaagcctttcagagcctttgctttcgtaacattcgctaaccctgagata
gcccagaccctctgtggtgaagaccacgtgatagatgggaccagtgtccatgtcagcagt
gctgcccccaagaatatggatcgccacggtgatcgcaaaggtggaggtggggggtacaac
caaggtttcaaccaaggctttgggaatcagggtggatggagcccagggcctcgcccctcc
ccttcccatcaaaataatattggtaagcagaacagtcaaaacatggctcaaggggttgat
aaccaggttgctaacaacattggaatgaatcttctaaacagcgccatgatggcagctgcc
caagctgttttaagtgggcaaggtcagtggggacccctggggctggcaggacagggaggt
ggtgggggcgggggtgggggtggaggtggaaatggggacactaccccgaatcagaacaac
agtaatcagacctttgggaatattggtgggggtggaggacagggcggtggaagcaacttc
ctagggtggggtggtccacattctgatgggcaaagccacagtcctgcaagtcagggacag
tatggaggatggggaactcatggcagtggggggaggtcaggggggtggagctga
DBGET
integrated database retrieval system