KEGG   Haliotis rufescens (red abalone): 124116679
Entry
124116679         CDS       T07893                                 
Name
(RefSeq) TAR DNA-binding protein 43-like
  KO
K23600  TAR DNA-binding protein 43
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124116679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrf03019]
    124116679
Messenger RNA biogenesis [BR:hrf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     124116679
SSDB
Motif
Pfam: TDP43_N RRM_1 RRM_7 RL
Other DBs
NCBI-GeneID: 124116679
NCBI-ProteinID: XP_046334067
LinkDB
Position
Unknown
AA seq 437 aa
MSQYIQVTEEENEEPIEIPSEDDGTLLLTTLSAQFPGACGMKYRNPETGAYRGIRLVDGR
LHPPDGLWESHVYVSVFPKENKRKGEEGQENPAAKTKRIETSPCSTDLIVLGLPWKSTED
DLKKYFAQFGELLLVQVKRDIKTGQSKGFGFIRFVEHSAQVKCMSQRHMIDGRWCDVTIP
NSKEGAQQLMNRKVFVGRCTENLSAENLRNYFGKFGEVVDVFIPKPFRAFAFVTFANPEI
AQTLCGEDHVIDGTSVHVSSAAPKNMDRHGDRKGGGGGYNQGFNQGFGNQGGWSPGPRPS
PSHQNNIGKQNSQNMAQGVDNQVANNIGMNLLNSAMMAAAQAVLSGQGQWGPLGLAGQGG
GGGGGGGGGGNGDTTPNQNNSNQTFGNIGGGGGQGGGSNFLGWGGPHSDGQSHSPASQGQ
YGGWGTHGSGGRSGGWS
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgagtcagtatattcaagttacggaggaggagaacgaggaacctattgaaattccaagt
gaagatgatggtaccctgttattgacgacactttctgcccagtttcctggagcatgtgga
atgaaatatcgcaatccagaaaccggcgcttatcgtggtatccgccttgtagatgggcgc
ctgcatccaccagatggtttatgggaatcccacgtctacgtttcggtgtttccaaaagaa
aacaaaaggaagggcgaagagggccaagagaacccagcagccaagacaaagcgaatcgag
acatcaccatgcagcacagatctcattgtccttggtctgccatggaagagtacagaagat
gacctaaagaaatatttcgcccagtttggagaactgcttttggtgcaggttaagcgagac
atcaagactggccagtccaaaggatttggtttcattcgatttgtggaacactcagctcaa
gtgaagtgcatgtcccagcgtcacatgatagatggcagatggtgcgatgtcaccataccc
aactcaaaggaaggtgctcagcagctcatgaacaggaaagtctttgtggggagatgtaca
gaaaacctgagtgctgaaaacttgcgaaactactttggcaagtttggtgaagttgtggac
gtcttcattccgaagcctttcagagcctttgctttcgtaacattcgctaaccctgagata
gcccagaccctctgtggtgaagaccacgtgatagatgggaccagtgtccatgtcagcagt
gctgcccccaagaatatggatcgccacggtgatcgcaaaggtggaggtggggggtacaac
caaggtttcaaccaaggctttgggaatcagggtggatggagcccagggcctcgcccctcc
ccttcccatcaaaataatattggtaagcagaacagtcaaaacatggctcaaggggttgat
aaccaggttgctaacaacattggaatgaatcttctaaacagcgccatgatggcagctgcc
caagctgttttaagtgggcaaggtcagtggggacccctggggctggcaggacagggaggt
ggtgggggcgggggtgggggtggaggtggaaatggggacactaccccgaatcagaacaac
agtaatcagacctttgggaatattggtgggggtggaggacagggcggtggaagcaacttc
ctagggtggggtggtccacattctgatgggcaaagccacagtcctgcaagtcagggacag
tatggaggatggggaactcatggcagtggggggaggtcaggggggtggagctga

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