Haliotis rufescens (red abalone): 124128812
Help
Entry
124128812 CDS
T07893
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03272
Virion - Hepatitis viruses
hrf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124128812
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124128812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124128812
Membrane trafficking [BR:
hrf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124128812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
124128812
NCBI-ProteinID:
XP_048255748
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MSPWSRLHNACFFSVLVAIAQAGRCSEGKFLCDGERCVPTRWKCDGTYDCRDHSDEESCE
LKTCGTHYFRCWNGQCVTRKWRCDGEYDCADGSDETECNPSTVTVTTASTSLASSQSPTT
KASAVSPTAGWETPRVVIATNKKLYSVTISGVAPPVQEMGVLPGLIGELQGFDMNVRRRQ
LCWTDSQRTDVICGSVGENLTLASYKMVDSTLHGATFPADLAYDWIHGHVFWTETVRGTL
YMGQPEPPFSQKKTLIGPGLAEPSLLVIEPSCGWLYVTEFGVRIQRYHRDGSDGQVVVKG
NTTSITGLAIDQITKRLYWLDTGRRTVSSCLLDGGGRRKEHRLQTRYDTVGLAVHTHNNR
TSIYWGEATSGKVKRVDLDLGPRQEQLLSQHEGGIRGIKIFGHSSQPPSTNRCEGSPCSH
FCLPVDQPGEARDYRCECPDAFSLNPDGHSCSSDANGQKRKSVPLKTCKQAKFSCLSEDK
RCVSVRAVCNNRKNCADHSDEHTFCNELDPDPSPAVPGTELDPGPQSRSPWYRVGPRTPV
PQSLVQSWTPDPSPAVPGLTATHMGTELDPGPQSRSPWYRVGPRTPVPQSLVQSWTPDHS
AAVPGLTATWSATYLLSVESGIIKRIHVTDSFSTSTMEQSIRNARGLGVDTRRRQLFFTT
KFSIVRADITNSLGLENTTPVLEDTSVQVGDLSVDWLHGLLYWIDTKHNKVTATTMDGAI
SKVVYTGGRLNAIAVDPFKGVFYLADNTWRPRIYMCGMSGGGRTVFIGDMASIRSVMIDF
KTNMVYWTDVTINALMALPSSGHGALNVYSDPHQGDMTGLAWSKNWIYISDFGKNTVRRF
FRKRWENVRPEADGPTDIAALDIASQPVGITDCARRNGGCSHMCLPRFTDHSCACPAPLA
LVGSSCYYKDVLLVQGKDYITRVDLATLQHGEFDRASSSVTPYGSPATPVSLDFDFRNNA
LYWTDPGLKGIYMSRLKENMEIESVETLFSTGVDEPEGLAVDWVDHNVYWSDTARHVIIA
ASLKTRAKTTLLDSGLGTVRGIAIHPQAGLLFWTNWGDVIASKVEKCELDGSHRTPIITS
GLHTPNGLAIDYQAQRLYVGDAGRDMIISCSMLGNDCYTLHTSSQREELISLTVDHNYVY
WTDLRRGNVMRMDKHSGGDKLLVLSSAVHPHGVKPFNPDQQPAGNAVCGSDNRGCLICLP
AVRKGSRDNFRCACPDGMSLGEDEKSCRTSKVCEAGYREVHRECEDVDECSQPGTCSHTC
HNIPGGFTCTCRLGYILVNATRCRLEGSPAPALLVVDWQRLRVIDQLDSPIPRVVDIRRQ
PAMKRPGALDVDMETGRVFWADLKSKTMNMATLNGSTLLSPTVLVDSGIRLPESVAFDWL
HKALYWVDSTDGAIRVVALATRFSRTVHRHLDRPRALVLDPNEGRLYWSTWGETPSIETS
GMDGSGRTAIITTDIVWPNGLTIDYGERRLMWTDGNMGAIFSSDMDGSNRREVVFSHSEQ
LQQMFSVAVIEDYVYWTDWRRRSLSRVRKTTGRDMRTYTTVTLRRPLDVKVMHQDRQPKG
TNRCGINNGGCSYICSPAPGGRMFACQCPDHMLVGSRCLDPA
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtggtccagattacataatgcgtgtttcttctcggttttggtcgccattgca
caagctggcaggtgttcggagggcaagtttctctgtgacggggaacgatgtgtgcccacc
aggtggaaatgtgatggcacctatgactgtcgggatcactcagatgaagagagctgcgaa
ctcaaaacatgtggaacacactacttccggtgttggaatggtcagtgtgtgacgagaaag
tggcgatgtgacggtgagtatgactgcgctgatggaagtgacgagacggagtgcaatcct
tccactgtgaccgtgactactgcatccacatcactggcctcatcgcagtcgcccacaacg
aaggcgtcagcagtcagccccactgcagggtgggagacgccgcgtgttgtcatcgcaacg
aacaagaagctgtacagtgtaaccatctcgggggtcgcgcctcctgtccaggagatgggt
gttttaccaggcctgataggtgagctgcaaggcttcgacatgaacgtcagacggcgtcag
ctatgctggacggattctcagcggacggatgtgatttgtgggagtgttggggaaaaccta
acactagcaagctataagatggtcgactccaccctccatggcgcgacctttcccgcagac
ctcgcctatgactggatccatggccacgttttctggacagagaccgtcaggggcacactg
tacatggggcagccagagccaccgttctctcagaagaaaactcttatcgggcctggccta
gcggaacccagcctcttggtgatagagccaagttgtgggtggctgtacgtgactgagttt
ggcgtgaggatacagcggtatcatcgagacgggagtgacggacaggtggtggtgaaggga
aatactaccagtataacgggtctggcgatagaccagattacaaaacgcctctactggctg
gacactggcaggagaactgtatccagctgtcttcttgacggcggaggccgcagaaaagaa
cacaggctccagacgaggtatgacacggtgggtctggccgtgcatacacacaacaacagg
acaagtatttactggggtgaagctacatcaggaaaagtgaagcgtgttgaccttgacctt
ggaccccggcaggagcaattgctatctcagcatgaaggtggcatccggggcatcaagatc
tttgggcacagttcacaaccaccaagcactaatcggtgtgaagggtccccctgttcccat
ttctgtctgccagtcgaccagcccggggaagcccgtgactaccggtgcgagtgcccggat
gcgttcagcctgaaccctgacgggcatagctgcagttccgacgccaacggacagaaacga
aaaagtgtgcctttgaagacctgcaaacaagcgaagttcagctgtctaagtgaagacaaa
cgctgcgtttctgtcagggccgtgtgtaacaatcgcaaaaattgtgccgaccactccgac
gaacacacattttgcaatgagttggacccggaccccagtcccgcagtccctggtacagag
ttggaccccggaccccagtcccgcagtccctggtacagagttggaccccggaccccagtc
ccgcagtccctggtacagagttggaccccggaccccagtcccgcagtccctggcctgaca
gccacacatatgggtacagagttggaccccggaccccagtcccgcagtccctggtacaga
gttggaccccggaccccagtcccgcagtccctggtacagagttggaccccggaccacagt
gccgcagtccctggcctgacagccacatggtcagccacgtacctgttgtctgttgagagc
ggaatcatcaaacgcatccatgtgacagacagtttcagcacgtctaccatggagcaaagt
ataagaaatgcacgcgggctcggtgtggacacgcgcagaagacaacttttcttcactaca
aagttttccattgtccgcgccgacataacaaactcacttgggctagagaatacgacacca
gtccttgaggacacgtctgtacaggtgggcgacctgtccgtcgactggctccacggtttg
ctttactggatagacacaaaacacaacaaagtgacggcaacaaccatggacggagcgatc
tccaaggttgtctacactggaggaaggctcaacgccattgcagtagatccattcaaaggt
gtgttctacctggctgacaacacctggcggccaagaatatatatgtgtggtatgtctgga
ggaggcagaacagttttcattggggatatggcgagcatcaggagtgttatgatcgatttc
aaaaccaacatggtgtactggacagacgtcacaattaacgcgttgatggccttgcccagc
agtggtcatggggctttgaacgtgtacagtgacccacaccagggagacatgacgggtctt
gcctggtccaagaactggatatacatctctgactttggcaagaacactgtcaggagattc
tttcggaagcgctgggagaacgtgcgcccggaggctgatggccccacagacatcgccgcc
cttgacattgcttctcagccagtcggtataactgactgtgctcgccgtaatggagggtgt
tctcacatgtgtctccccagatttacggatcattcttgtgcctgccctgcgcccctcgct
ttagtcggatcatcatgttattataaagacgtgctattggtccagggtaaggactacata
acaagagtggacctcgccaccttgcagcacggggagtttgatcgggcatcatcttctgtc
actccatacggctcgcccgccacaccggtttcccttgattttgacttccgaaataatgct
ctctactggacggatcctggtttgaagggcatttacatgtcaaggttgaaagagaatatg
gaaatagagtcagttgagactttgtttagcactggtgtggacgaacctgaaggactcgcg
gtggactgggttgaccacaatgtttactggtcagatactgcccgtcacgtcatcatagct
gcctcgctaaagacccgtgcaaagacgacccttctggactctgggttgggaactgtccga
ggaatagcaatacacccacaagcggggttgctcttctggaccaactggggcgatgtcata
gcctctaaggtggagaaatgtgaactggatggctcccacagaacaccaatcataacatca
ggccttcacacgcccaatggtttggcgatagattaccaggcacagcgcttgtatgttgga
gacgccggaagagacatgatcataagctgcagtatgttgggcaacgactgctacacactt
cacaccagttcacagagggaagaactcatctccctcacagtggaccataactacgtgtac
tggactgacctgagacgcggtaatgtcatgagaatggacaaacattcaggaggagacaag
cttttggttctcagcagcgccgttcatccgcacggcgtgaagcccttcaaccctgatcaa
caaccagcagggaatgctgtgtgtggctcggacaacagaggctgtttaatctgtctcccc
gctgtccggaagggatcaagagacaactttcggtgcgcatgtccagatggcatgtcactt
ggtgaagacgagaagtcatgtcgtacgtcaaaggtatgtgaggccgggtacagagaagtg
catcgtgagtgtgaggatgtggacgagtgcagccagccaggcacctgctctcacacatgc
cacaacataccgggaggcttcacctgcacatgtcgcctgggatacatcctcgtcaacgca
acccggtgtcgactagaaggtagtcctgcccctgcccttcttgttgtggattggcaaaga
ctccgtgtgatagaccaactggactcccccatcccccgggttgtcgacatccgccgccag
ccagccatgaagcgaccgggcgcactggacgttgacatggaaacagggcgtgtcttctgg
gcagatctcaagtcaaaaaccatgaacatggccactctgaatggaagcactctgctttct
ccaactgtgttggtcgattccgggataagactccccgagagcgttgcgtttgactggctg
cacaaggctctgtactgggtggactccacggatggtgctatcagggtggtcgccctggca
accagattcagcaggacggtgcacagacatctggatagaccacgagctctagtgcttgat
ccgaatgaaggacgcctttactggagtacgtggggggagacaccgagtatagaaacgagt
gggatggacgggtcaggaaggacggccatcatcacaaccgacatcgtctggcccaatggc
ttgaccatagactatggtgaacggcgtttaatgtggactgacgggaacatgggtgcaatc
ttcagctccgacatggacggcagtaatcgaagagaagtggttttcagccacagtgaacaa
cttcaacaaatgttctctgtggctgttatagaggattacgtctactggacagactggcgg
cgccgatcactgagcagggtccgcaagacgactggacgtgacatgaggacctatacaacg
gtgaccctcagaagaccactagatgtcaaggtcatgcatcaagacagacaacctaaaggc
acaaaccggtgtggcatcaataacggtgggtgttcttacatctgttcacctgctcctggc
gggaggatgttcgcctgtcagtgcccggatcacatgctggtgggatctcgctgtctggat
cctgcgtag
DBGET
integrated database retrieval system
