Haliotis rufescens (red abalone): 124130981
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Entry
124130981 CDS
T07893
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124130981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124130981
Spliceosome [BR:
hrf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124130981
Complex C
U5 SnRNP specific factors
124130981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
Motif
Other DBs
NCBI-GeneID:
124130981
NCBI-ProteinID:
XP_046349989
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDDDDEEDDRDDDEYMDRDDDEDMDHDDMDDQPEMAVVLH
EDKKYYPTAEEVYGPDVETIVQEEDTQPLTEPIIAPVKKKKFSMAEQDLPETTYNMEFLA
DLMDSPELIRNVTLCGHLHHGKTSFVDCLLEQTHPDIQGRADKDMRYTDTLFTEQERGVS
IKSTPITVVMQDTKNKSYLINVFDAPGHVNFSDEATAAMRLSDGVCIFVDAAEGVMLNTE
RLIKHALHEKLAITICINKIDRLILELKLPPTDAYYKLRNILDEINGVISMYSEEEDGLM
ISPLLGNVSFASSYYRFCFTLKSFGKIYADTYGGINEKEFARRLWGDIYFNSKTRKFTKK
PAHNTSQRSFVEFILEPLYKIFAQIVGDVDECLPRVCDELGIHLTKEEQKLNIKPLMRLI
GRRFFGDFTGFVDMCVEHIHSPVKNAKSKIEHIYTGPADSELAEDMTHCDPDGPLMIHTT
KLFPTSDGTSFHVFGRVLSGTLYSNQEVRILGENYTLQDEEDSRFGQVGRLWIAEARYKV
EVNRVPAGNWVLIEGIDQPIVKTSTITDTSSNEEVYIFRPLKFNTSSVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQITWPRKKLGEFFQ
TKYDWDLLAARSIWAFGPDAMGPNILVDDTLPSEVDKSVLGLVKDSIVQGFQWATREGPL
CDEPIRNVKFKILDAMIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYNFVEVMAP
ADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLL
ELAKQDVMLNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgagtttggcaactatattggccctgaactggatagtgat
gatgatgacgatgatgaggaagatgatcgtgatgacgatgaatacatggacagagatgat
gatgaagacatggatcatgatgacatggatgaccagccggagatggccgtggtgctgcac
gaggacaagaagtactaccccaccgcggaggaggtgtacgggccggatgtggagactata
gtacaagaggaagacacacagcccttaacagaacccatcatagcgccggtgaaaaagaaa
aagttttccatggccgagcaagatcttccagaaactacatacaatatggagtttcttgct
gatttaatggactctccagagctgatacgaaatgtcacactttgtggacatctccatcat
ggcaagacatccttcgtcgactgcctcctggagcagactcaccccgacatccagggccgg
gcagacaaggatatgcgatacactgacactctcttcacagaacaggagcggggtgtgagc
atcaagtcgacgcccatcaccgtggtgatgcaggacacaaagaacaagtcctacctcatc
aacgtcttcgatgctccaggccatgtgaacttctcagatgaggctacagcggcaatgagg
ctcagtgatggtgtctgcatttttgttgatgctgctgaaggagtgatgttgaatacggaa
cgtcttatcaagcacgcactccatgagaaactagccatcaccatttgcatcaacaagatc
gaccgcctcatcctggagctgaagctgcccccgaccgacgcctactacaagctgcgtaac
atcttggacgagatcaacggtgtcatcagcatgtactcggaggaggaggatgggctgatg
atctcgccgctgctaggcaacgtcagcttcgccagctcctactaccggttctgtttcaca
ctcaagtccttcggcaagatctacgccgacacgtacggtggcatcaatgagaaggagttt
gctcgtagactctggggagacatttatttcaacagtaaaacgaggaagttcacaaagaag
ccagcccacaacacgtcccagagaagcttcgtggagttcatccttgaacccctgtacaag
atatttgcccagattgtcggggacgtcgatgagtgtctgccgcgggtgtgtgacgagctc
ggcatccatctcacaaaggaggagcagaaactgaacatcaaaccgctgatgaggctgatt
gggcgccgcttctttggggacttcacagggtttgtggatatgtgtgtggagcacatccac
tcccccgtcaagaacgcaaagagtaaaatcgaacacatctacaccggcccggccgactcc
gagctggcggaggatatgacccactgtgacccggatggccccctgatgatccacaccaca
aaactgttcccgacgtcagatgggacgagcttccatgtgtttggtcgtgtgttgagcgga
actctctactccaaccaggaagtgaggattcttggagagaactacacactgcaagacgag
gaggactcgcgcttcggacaggtgggacgtctctggattgccgaagcaaggtataaggta
gaggtgaacagagtccctgctgggaactgggtgctgatagagggcatcgaccagcccatc
gtgaagacctccaccatcacagacacttccagcaacgaggaggtgtatatattccgcccc
cttaagttcaacacaagctctgtcatcaaaatagcagtggagccagtgaatccgtccgaa
ctgcctaaaatgttggatgggttgaggaaggtgaacaagagttatcccctcctgaccacc
aaggttgaggagtcgggcgagcacatcatcctggggacgggggagctgtacctggactgt
gtgatgcacgacctccgcaagatgtactccgagatagacatcaaggtggctgacccagtc
gtgtccttctgtgagacggtggtggaaacatcgtcactcaagtgcttcgctgaaacacca
aacaagaagaacaagttgacgatgattgcggaacccctggagaagggtctggcggaggac
attgagaacgaggtggtgcagatcacatggcccaggaagaagctcggggagttcttccag
accaagtatgactgggatttgctggctgctcgatctatctgggccttcggacccgacgca
atgggacccaacatcttggtggacgatactctgccatccgaggttgacaagtcagtcctg
gggttggtgaaggacagcatcgtgcagggattccagtgggcaaccagagaaggaccgctg
tgtgatgaaccaattcgtaacgtaaagttcaagatcctagatgccatgattgccggggag
ccgatacaccgaggtggcggtcagatcatccctacagccaggagagtggcctactccgcc
ttcctcatggccaccccgcgtatgatggagccctacaacttcgtggaggtgatggcgcca
gctgactgtgtgtccgcagtctacacagtgctggcaaagaggagaggtcatgtgacccag
gatgctcctgtgcctggctccccactgtacacgatcaaagctttcctgcccgccatcgac
tcgtttgggtttgagaccgatctgagaacacacacacagggccaggccttttgtctctcg
gtcttccaccactggcagatcgtgcccggtgaccccctggacaaatccatcatcatccgc
cccctggagccgcagcccgcaacacatctcgcccgggagttcatgatcaagacacggaga
cgcaagggtctgagcgaggatgtatccatcaacaagttcttcgacgaccctatgttgttg
gagttggccaagcaggacgtgatgctcaactaccccatgtag
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