KEGG   Haliotis rufescens (red abalone): 124132061
Entry
124132061         CDS       T07893                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X2
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124132061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hrf03000]
    124132061
   04121 Ubiquitin system [BR:hrf04121]
    124132061
   03036 Chromosome and associated proteins [BR:hrf03036]
    124132061
Enzymes [BR:hrf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     124132061
Transcription factors [BR:hrf03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    124132061
Ubiquitin system [BR:hrf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     124132061
Chromosome and associated proteins [BR:hrf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124132061
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124132061
SSDB
Motif
Pfam: PHD_4 zf-CXXC JmjC Cupin_8 F-box-like JHD F-box LRR_4 LRR_At1g61320_AtMIF1 Cupin_1 JmjC_2
Other DBs
NCBI-GeneID: 124132061
NCBI-ProteinID: XP_046351629
LinkDB
Position
Unknown
AA seq 1282 aa
MSETTDNGRRLRAKERKHYTDEDIDDDEIEGKRNYNIEDKLLRSTYKGNYVQYMKGPDFT
LKFVQENGLMQPILFKDKTGLGMRVPSENFKVSDVKQCVGSRRMLDVMDVNTQKGLEMTM
KDWVRYYENTSRDRLLNVISLEFSHTRLENYVESPTLVRQVDWVDRVWPRHLKDCQTEST
NIIEKMKYPKVQKYCLMSVAGCYTDFHIDFGGTSVWYHILHGEKIFWLIPPTEANVELYE
NWVLSAKQGDIFLPDQVSECQKIHLQAGDTFIIPSGWIHAVYTPRDSLVFGGNFLHSFNI
LQQLRVADVEDKTHVPQKFRYPFYNEIMWYVLTRYVECVGKKSYLKKPEKIDLDEQPESP
GSFFTSDDSRPPSRNPDSRPPSRNPEEHSPVDFSKIKLEKDEEQKLSKSITIPLTRIDDS
GIKKSQSDDESLRNSRSVRKLSTDSVHSENGFAENGDMDKRSSDGGRRWIHLTKYELDGL
AKLVEKVENLPLNKRGVPKDLLDPDAVIRDVRQLLADHKYDNMKAAASGEPTCWVPETTK
KVKKLKTTTTYVGGKTPKGSTANKVASGNRRRRTRCKKCEACTRSDCGECNFCKDMRKFG
GPGRMKQSCISRKCMAPVLPHTVTCCICEKDGKMASEDNPDEMETVVMECSLCWEIVHPA
CLKEKHDSLDSDGIVNEDLPNSWECAKCCNEGKQGQLKPKTPKPVGRPKGIDSRRSSASS
VGDLDVKEEEVELEVTLEATLDNNNTKMAPVKAVEGKRVTSKETPAPPKPTPSPTPLPTP
PKLIKREKLVQHRVSQQRALKRDRLKHVRRLQSSDTVKRVLPQVRATIIPKSPPQFISRS
SKRALTDSSDEDDDDDDDDAPSRKRPRREGRTRARIMAASRTKLRPRFFKTAGRGQDRGV
GQLQTSPAKRGCHGGGQGSSGHQNKSPKGKGSNRDRSNERSNPPSDRGEGQNPDQPAGFS
GSRSRRGDGAGPVCDKELRVVINRYVVRPAPIPPPADTVELDTGDVHVLKRQMWMSVFKK
LDLGDLARCLCVCKTWNRWCINRCLWKEIDLRQTRIRQSHLVGIVRRQPESLILARSVMT
PKQLSWLVVRLPQLHHLDLSYLSWGTIGGLCSSSCPLLRSLSLNWAVGLSEDSFRDLVLP
PADRKPALKVISRLHKVHTLSLAGTEVTDQSIEILLQHMHNVESLNLSYCVQLTNATVVA
LTKRDSPLMNKLKQLDLSGCLQITDHVFHFLKACSQLETVKFHGCPKVTRHACQKFVDSY
ICHQLSVQVDKMIITTPDTSDG
NT seq 3849 nt   +upstreamnt  +downstreamnt
atgagtgagacgaccgacaacggccgtagattgagagcgaaagagcggaagcactacaca
gatgaagacattgatgatgatgagattgaggggaagcgcaactacaatatcgaggataag
cttcttcgcagcacctacaagggaaactatgtccagtacatgaagggacccgacttcacc
ctgaagtttgtccaggagaatggcttgatgcagccaatactcttcaaggacaagaccggg
ctggggatgagggtcccgagtgaaaacttcaaagtcagtgatgttaaacagtgtgtcgga
agtcggcgtatgctcgacgtgatggatgtcaacacccagaaaggtcttgagatgacgatg
aaagactgggtgcggtactacgagaacaccagccgagaccgcctcctcaacgtcatcagt
ctggagttcagccatacgcggctggagaactatgtcgagtcccccacgctggtgaggcag
gtggactgggtggaccgagtgtggccgaggcatctcaaggactgccagacagaatctacc
aacatcatagagaagatgaagtaccctaaagttcagaagtactgcttgatgagtgtggcg
gggtgctacacggacttccacatcgacttcggcggcacctccgtgtggtaccacatcctc
catggagagaagatattctggctcatccccccgacagaggcaaacgtggagctctacgaa
aactgggtgctgtccgccaaacaaggggacatatttctcccggaccaggtgtcggaatgt
cagaagatccatctccaggccggcgatacattcatcattccttcaggttggatccacgct
gtgtacactccacgggactctctggtgtttggaggtaacttcctccacagcttcaacatc
ctacagcagctgcgagtggccgacgtcgaggataaaacacacgttccacagaaattccga
tatccattttacaacgagatcatgtggtacgtgttgactcgctacgtggaatgtgtgggc
aagaaatcgtacctgaaaaaacccgagaagatcgacctcgatgagcagccagagtctcca
ggatccttcttcaccagcgatgattcccggccaccttcccggaaccccgactcccggccg
ccatcccggaacccagaagaacattcaccggtcgacttttcaaagatcaagctggagaag
gatgaagaacagaaactgtccaagagcatcaccatcccgcttactagaattgatgattct
gggatcaagaagtcacaaagtgatgacgaatcgttgaggaattcaagatcagttcggaaa
ttgtcaacagactcggtgcattctgaaaatggttttgctgaaaatggtgacatggacaag
agaagcagtgatggtgggaggcggtggatacatttgaccaagtatgagttggacggactt
gccaagctggtggagaaggtggagaacttaccgctcaacaaacggggggttcccaaagat
ctcctggaccccgacgcggtgataagggatgtcaggcaacttctggcagatcacaagtac
gacaacatgaaggcggcggcaagtggagagcccacgtgctgggtgccggaaaccaccaag
aaagtgaagaagctgaagacaacaacgacgtacgtaggagggaagacaccaaaaggcagc
acagcgaacaaagtggcgtctggaaaccggcggcgacgcacaaggtgcaagaagtgcgag
gcgtgtacgaggtccgactgcggggaatgcaacttctgtaaagacatgcgcaagttcggg
ggccctggcaggatgaagcagtcctgtatcagcaggaagtgtatggcgcctgtgttgccg
cacactgtcacctgctgcatctgtgagaaggacggcaagatggcgagtgaggacaacccg
gacgagatggagacagtggtcatggagtgcagcctctgttgggagatcgtccatcccgcc
tgtctcaaggagaagcacgactctctagacagtgatggcatcgtcaacgaggacctcccc
aacagctgggagtgcgccaagtgttgtaacgaaggaaaacaggggcagctcaagcctaaa
acacctaaaccagtcggccgacctaaaggaattgacagtagacggtcgtccgccagcagt
gtgggtgaccttgacgtgaaggaggaggaggtcgagttggaggtgaccttggaggcgacc
ttggacaacaacaacacaaagatggcgccagtgaaggccgtcgagggaaagagggtcaca
tccaaggaaacaccagctcccccgaaacccacgccctccccaacacccctccccacacca
cccaagctcattaaacgagagaaacttgtccaacatcgagttagccaacagagggcgctg
aagagagacagactgaagcatgtgagacgtctgcaatcgtccgacacagtcaagagagtt
ctgcctcaagtgcgagctaccatcatcccaaagtctcctcctcagttcatcagtcggagc
agcaaacgggcgttaacagacagcagcgacgaagacgacgacgacgatgatgacgatgcc
cctagtagaaagcgtccccgccgagagggccgcacgcgagctcgcatcatggccgcctcc
cgcaccaaactacggcctcgcttcttcaagacggctggtcgtggacaggacagaggtgtg
ggtcagctgcagacatcgcctgccaagcgaggctgtcatggtggaggtcaagggtcaagt
ggccatcagaacaaatcaccaaagggaaagggttcaaacagggaccgatcgaatgaaagg
tccaatcccccatccgacagaggtgaaggtcagaatcctgatcagccggctgggttttca
gggtcaaggtcaagacgtggggatggagcaggtcctgtgtgtgataaggaattacgggta
gtgattaacagatatgttgtacgtcctgcgccaatcccaccgccagcagatacagtggag
ctggacacgggagacgtccatgttctcaagcgccagatgtggatgagtgtgtttaagaaa
ctggatttgggcgacttagcccggtgtttgtgtgtgtgtaagacgtggaatcggtggtgc
atcaaccgatgtctgtggaaggagatcgatctgcgacagacacgaatccgacagagccac
ctggtggggattgttcgtcgacagccggaatctctgatcctggcacggagtgtcatgacc
cctaaacagttatcctggctcgtagttcgtctgcctcaactccaccatcttgacttgtcg
tatctgtcatggggaactattggcggcctctgctcctcttcctgccccctcctacgctcc
ctctccctcaactgggccgtcggactcagcgaggactccttccgcgaccttgtccttcct
ccagcagacaggaagcctgctctcaaggtcatcagccgcctccacaaggttcacacgctg
tcattggctggaactgaggttactgaccaatcaattgagatcctattgcagcacatgcac
aacgtggagagcctgaacttgagctactgcgtccagctgaccaatgccaccgtggtggcg
ctgaccaagagggacagtcccttgatgaacaagctgaaacagcttgacctctcaggatgt
ctgcagataacggatcacgtgtttcacttcctgaaagcatgctcccaactggagaccgtc
aagtttcacggctgtccgaaagtcacacggcatgcatgtcaaaagtttgtggattcctac
atctgccatcagctctccgtacaggtggataaaatgattatcaccacgcctgacacaagt
gatggttag

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