| Entry |
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| Name |
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| KO |
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| Organism |
hrf Haliotis rufescens (red abalone)
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| Pathway |
| hrf03082 | ATP-dependent chromatin remodeling |
| hrf05100 | Bacterial invasion of epithelial cells |
|
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| Brite |
KEGG Orthology (KO) [BR:hrf00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124133062
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124133062
09142 Cell motility
04814 Motor proteins
124133062
04820 Cytoskeleton in muscle cells
124133062
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124133062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hrf03021]
124133062
03019 Messenger RNA biogenesis [BR:hrf03019]
124133062
03036 Chromosome and associated proteins [BR:hrf03036]
124133062
03029 Mitochondrial biogenesis [BR:hrf03029]
124133062
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:hrf04812]
124133062
04147 Exosome [BR:hrf04147]
124133062
Transcription machinery [BR:hrf03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124133062
Messenger RNA biogenesis [BR:hrf03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
124133062
Chromosome and associated proteins [BR:hrf03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
124133062
NuA4 complex
124133062
Chromatin remodeling factors
BAF complex
124133062
PBAF complex
124133062
GBAF(ncBAF) complex
124133062
SWR1 complex
124133062
Mitochondrial biogenesis [BR:hrf03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
124133062
Cytoskeleton proteins [BR:hrf04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
124133062
Exosome [BR:hrf04147]
Exosomal proteins
Proteins found in most exosomes
124133062
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
377 aa
MTNYLDLGALVLDNGSGMCKAGFAGDDAPRAVFASVVGRPRHKGVMVGMGQRDCYVGDEA
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEQHPILVTEAPLNPKANREK
MAQIMFEGFSIPAFFVSVQAVLSLYASGRTTGIVLDSGDGVTHAVPIYEGYSMPHAILRI
DLAGRDLTDYLVKILSERGYSFTTTAEREIVRDIKERLCFVTNDFDRDFKTCTSSSDMER
TYELPDGQVIRIDNERFRCPEPLFQPALIGMETPGVHEYIYNSIQKCDVDIRKDLYCNIV
ISGGSTMFPGITSRITREVAELAPPVIRVKVIAQPERKYAVWIGGSILASLSTFQQMWIS
KQDYIDCGPNIIHRKCF |
|---|
| NT seq |
1134 nt +upstreamnt +downstreamnt
atgaccaactacttggatctcggggcgctcgtattagacaatgggtccggtatgtgcaag
gccgggtttgcaggggatgacgccccacgggccgtgtttgcttctgttgttgggagaccc
agacataagggcgttatggtggggatgggtcaaagagactgctatgtgggtgacgaggct
cagtccaaacgtggaatcctcactctgaagtaccccatagagcacggcatcgtcaccaac
tgggacgacatggagaagatctggcaccacaccttttacaacgagctgcgagtggcgccc
gagcaacacccaatcctagtaaccgaggcaccactcaatccaaaagccaatcgggaaaag
atggcacagataatgttcgaaggctttagcatccccgccttctttgtatcagtccaggcc
gttctgtccttgtatgcttctggtagaaccacgggcattgtcctggattccggggacggt
gtgacccatgcggtgccaatatacgaggggtactcaatgcctcacgccatattgaggatt
gatctagcgggaagggacctcacagactaccttgtaaagatcttgtcagagcgagggtat
tccttcaccacaactgccgagcgagagatcgttcgcgatataaaggaaagattatgtttc
gttaccaatgactttgatagagactttaaaacgtgtacgtcaagctcagatatggaaagg
acctacgagttgccggacggccaggttatccgtattgacaacgagaggttcagatgcccc
gaaccgctctttcagccagccttgattgggatggagacacccggtgttcatgagtatatc
tataactcaattcagaaatgtgacgttgatatcaggaaggatctctactgcaacatagta
atttcagggggctcgactatgttcccggggatcacttccaggatcacgcgagaggtcgcc
gagctggccccaccagtcatcagggtcaaggtcattgctcagccggaacggaagtacgct
gtttggatcgggggttcaatccttgcatcgttgtccaccttccaacaaatgtggatcagc
aagcaggattacatcgactgcggaccaaatataattcataggaaatgtttttga |
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