Haliotis rufescens (red abalone): 124138946
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Entry
124138946 CDS
T07893
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrf04040
]
124138946
Ion channels [BR:
hrf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124138946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank_4
Ank
Ion_trans
Ank_3
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124138946
NCBI-ProteinID:
XP_046361820
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MWTDVVQFGSESSWRSRTWKTTVSETLSEPLPSNLVQLSNMENKDMSRDVSSEIPNGVTT
VFAAASKWNDSQLNPTMDGKRSLETVESAFSNACASGDIATVRAILSDLRFSVDYSDSLG
RTPLRLAVRNEHLEIVELLLERCSSIGVREALLLAINSGNVQMAELIQSHTTKDKRTLSH
GDDDYFFSQSHEDSQFSADTTPLILAAKRNHFQLVQMLIRQGETIPTPHAYLCNCRICIN
KRQFDQLRLAKTRLNAYRGLSSEAFISLSSKDPILRAFELAKELRNIAEIEKYYKTEYLS
LADKLSEFVVKLLDKVRCHDELEVILNKVAGEDEEEEETFAPLERIHLAIEFNEKKFVAH
PSCQQTLVSIWYSDVRPLESTNWLLRILLGLSMTILYPVLAVILWTAPSSRVARILRSPC
VKFTGRMISQALFLMFILVASLEHPTDRLLTSYGPLLNISAHYLSPNCTDETLCDFAVRS
SEFEIMKILIGLWLAGLLCQEIQEFYKSGMSGYFDSIFNYMDTAVIVLYITWASLKLVTV
HKVKISLEYFTHETSWHALSERQTEAQLHLYWLIADRYYWDRYDPENVMEAVFAVANIIS
FTRISYIFPADELLGPLQISLARMATDILKFVVIFMVLFMAFYVGLHNLYWYYPPVTRKA
WELRPHNITTKAEKHFGLHNQTFMTVFWATFGQTDNTAVELGEFQNIFTQNIGYWIFGAY
NIAIVIVLLNMLIAMMTRSFDIIQSEADTEWKFARSKLYMEYIKGDCVLPVPFNLFPSLR
ALLGHFRRIQDCFTTKDDPAPMYQGRVRDAEMFQTHTTTPGRRPTMKTGTKDVKDPGQGI
ETFRIGLSNTLVRNYTVDSFASGKLTYKRVIHRVIHRYLFDMQRGDGDEDDTKQDISTFR
HEILTTLHETRKEASEMYENMNERLGRLVSDFVALSKDKPPVNHQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtggactgatgttgttcagttcggttcggaatcatcatggcgctctcgaacatggaaa
acaacggtgagtgaaacgctctctgaaccattgccttcaaatctcgtgcaactctcgaac
atggaaaacaaagatatgtcgcgggatgtaagcagcgagattcccaatggcgtgaccacc
gttttcgctgctgcctctaagtggaatgactcacaattaaatccaaccatggacggtaaa
cggtcgctggagactgtggaaagcgctttctccaacgcatgtgcttcaggcgacatagca
acagttcgtgccattctgtcggacttacgattctcagtggactatagtgattcgctgggg
agaacccctcttcggcttgctgttcggaatgaacacctggagattgttgagcttctcctg
gaacgctgcagcagcatcggcgtccgcgaggctctccttctagctatcaatagcggcaac
gtccagatggctgagctaatacagagccacacaactaaggacaagcggacactaagtcat
ggcgatgacgactacttctttagtcagagccatgaagactctcagttctcggccgacacc
acgccccttattttggcagccaaacgaaaccatttccagcttgtgcagatgctgatacga
caaggggagacaatccctacgcctcacgcatacctctgtaactgtcggatttgtatcaat
aagcgacagtttgatcaactgaggctggccaagactcgtctcaatgcatatagaggcctc
agtagtgaagcctttatttccctttccagtaaggaccccattctgagagcattcgaactt
gctaaagagttaaggaatattgcagagatagagaaatattacaagacagagtatctatcc
ctggccgacaagctgagcgagttcgtagtcaaactgttggataaggtcagatgtcatgac
gaactagaggtcatcttgaacaaggttgcaggtgaagatgaggaagaggaagagacgttc
gcccctttggagagaattcacctggctatagaattcaacgagaaaaagttcgttgcacat
ccgagctgtcagcagacgctagtgagtatctggtatagcgatgtgagaccgttagagagc
accaactggttactgaggatcctgctgggtttgtccatgaccatcttgtaccctgtgtta
gccgtcatcctctggacagctccctcttccagggttgctagaatcctccgctctccgtgt
gtgaagttcactgggaggatgatctcacaggctctgtttctcatgttcattctcgtcgca
tccctcgagcatccaactgatcgcttgttgacgtcatatggcccactactcaacatcagt
gcccactatctcagcccgaactgcacggatgagacgctttgtgactttgccgtgcggtcg
tccgagtttgagatcatgaagattctcatcggactgtggttggcaggtttgttatgtcaa
gagattcaggagttctacaagagcggcatgtccggctacttcgactccatcttcaactac
atggacaccgccgtcattgtgctgtatatcacctgggccagcctgaaactggtgacagtc
cacaaggtgaagatttctctggaatatttcacacacgaaacatcctggcacgccctctcc
gaacgacagacggaggcacagctgcatctctattggttgatagcagatcgatactactgg
gacagatacgacccagagaatgtgatggaggccgtgtttgctgtagccaatataatcagc
ttcactcgaatcagttacatcttcccagctgatgaacttctgggtcctcttcagatctct
cttgcccggatggccacggatattttgaagttcgtggttatatttatggtgttgttcatg
gccttctacgtgggcctccacaacctgtactggtactacccacctgtaacacgcaaagcc
tgggagctccgcccacacaacatcacaacgaaggccgagaaacactttggcctgcataat
caaacctttatgacggtgttttgggcaactttcggacaaacggacaatacggcagttgaa
cttggtgaattccaaaatattttcactcagaacataggatactggatattcggggcctac
aacatcgccatcgtcatcgtcctgctcaacatgttgattgccatgatgacgcgatccttc
gacatcattcagtcggaagctgacacggagtggaagttcgcccgcagcaaattgtacatg
gaatacataaaaggagactgcgttctgcccgtccccttcaaccttttcccctcactcagg
gccctgctcggtcacttccgccgcattcaggactgtttcactaccaaggacgatcctgcc
cccatgtaccaggggagagtcagggacgctgagatgtttcaaactcatacaaccacaccg
ggccgtcgacccactatgaagactggtactaaagacgtaaaggaccccggtcaaggcatc
gagacgttccgcatagggctgtccaacactctcgtccgcaattacacagtagacagtttc
gcgagcggcaaactaacctacaagcgtgtgatacacagggtgattcatcgctacctattc
gacatgcagcgaggggatggtgatgaagacgacactaagcaagacatatctaccttccgt
cacgaaattctcacaacacttcacgagactagaaaggaggcaagtgaaatgtatgagaat
atgaacgaaaggttggggcgacttgtcagtgactttgtggctcttagtaaggacaaacca
ccagtgaatcaccagtga
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