Haliotis rufescens (red abalone): 124142693
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Entry
124142693 CDS
T07893
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrf04040
]
124142693
Ion channels [BR:
hrf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124142693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank
Ank_3
Ank_4
PKD_channel
Caveolin
DUF3734
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
124142693
NCBI-ProteinID:
XP_048256942
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MSKTMLPSCIVYNSPYSSPSRGLDHYGAADKRASTMPSQGSLFTNFEDVQLTDEERVFLN
AAYLGDVGIVRQSLEESGESSLNVNCVDYMGRNALHLAIDSEKLDVIEILLDNLSFNCIE
EALLHAISKGGTKIVKLIIEHPNFMAGEDRLRRLGGGEAFFRTEEKSQFPPDITPVILAA
HYNNHEIIQMFLSRNHTIEKPHPISCKCSDCVAKQNYDSLKRSRSRLNAYRALASPAYMA
LSSPDPIMTTFELRQEMMKLAEVEKEFKNEYLGMVEQCMNFACELMDLCRGTQEVEAVLS
ESGETTQRDPLARLKQAIRYEEKKFVAHPNCQQHMTSIWYGSEMGFLQSLNWFRKLIYLI
LFLPAIPFMCITYVFAPNIKFGRIMRCPVTKFITHTTSHICFLILLAAATFRITESGETI
TQTTEINETKYAHLSSEEKIQNILKETLRPANTLITHVQICIVFWILGLLWIECKQVYIS
GARAYTTDYYNFIDFSVLSMYLASYVLRFFTEYQVAAADRTSNGTNRARELLMQQNHTYF
HLLVAEIKNPNHKINYFMEASRFHWEANDPEIVSDVLFAIANVISFARTTYLMPAFEVLG
PLQISLGRMIGDITRFMVLFTLVLFAFMVGLHNLYWYYGAQKIKMEINGNLVSVHAAKAF
QGPHNLVFAVKKCQVLDSERGDIYCTDGSKRDPNTPPVFKSTLYGSSHHDSSTSIVESVG
MYLFGIYHVVIIIVLINMLIAMMSHSFEDIQTDCDVEWKFARTKLWLNYMDEGSTLPVPF
NMIPTPKSFYYVYIFFKDLIKHSKNGFLEYEKNRKQTFLKKRRETVCKTLDLKPDETSYI
DIMHRLVKRYLFKLERAKDETALKDMGNIRAEEVEFIEAPDVPPPPIPSDTPSRIPFATP
PIPEEEGEDNSKADGRASALSKRKASNRSHHTRRTSMANVPMTTTLAIPQLDAIQRSQKL
LDVRLQHLQANSKENNRLQDDVEFIRKLMTENQKALCNVVQALANIQGEIVNLAQCLKPA
PRPQSNAIPNAHGQTNAVSSNRASRKRSGPEEDDTKV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacgatgttaccttcgtgtatcgtgtataactcaccgtattcatctccctct
aggggcctcgaccactacggtgctgccgacaagagggcgtccaccatgccgtcccagggg
tctctcttcaccaactttgaggacgtgcagttgacggatgaggagcgcgtgttcctcaac
gctgcataccttggtgatgtagggattgtccgtcagtctcttgaagagagcggagagtcg
agtctcaacgtcaactgtgtcgactacatgggccgcaatgctctccatctggccatcgac
agcgagaagctggacgtcattgaaatcctccttgacaatctctctttcaactgcatcgag
gaggcgcttttacacgccatcagcaagggaggaactaaaattgtcaagcttatcatcgaa
catccgaacttcatggccggagaggataggttgcggagactggggggaggggaggcgttc
ttcaggacagaggagaaatctcagttcccccctgatatcacccccgttattttggccgca
cattataataaccacgagattattcagatgtttctctcacggaatcataccatagagaaa
ccccatcctatctcgtgcaagtgcagtgattgtgtcgctaaacagaattatgattcgtta
aaaaggtcaaggtcacgtttgaacgcttaccgtgcgcttgcaagtccagcgtacatggct
ctgtctagccctgaccccatcatgacgacctttgaactgcgacaggaaatgatgaagcta
gcggaagtggaaaaagagttcaagaacgagtacctgggcatggtggagcagtgtatgaac
ttcgcctgtgagctgatggacttgtgtcggggcacccaggaggtggaggctgtgctcagt
gagagtggggagaccacccagcgggaccccctggccagactcaagcaggctatccggtat
gaggaaaagaagttcgtggcgcaccccaactgtcaacaacacatgactagcatctggtac
ggctctgagatgggattcttgcagtcgctcaactggttccgcaaactcatatatctcatc
ctcttccttcccgccattccattcatgtgtataacctatgtcttcgcgcctaatatcaag
tttgggcgcatcatgcgctgcccagtgacgaagttcatcacgcacacgacgtcacacatc
tgtttcctcatcctcctggcggccgccacgttccgcatcaccgagtcaggggagacaatc
acccaaaccactgagattaatgaaaccaagtacgcccatctcagcagcgaggagaagata
cagaatatcttgaaggaaaccctccgcccagcgaatacactcatcactcatgtgcagatc
tgtatagtattttggatattaggtcttctatggattgaatgcaaacaagtgtacatctca
ggagcccgggcttacaccacggactattataacttcattgattttagtgtcttatctatg
tatctagcatcatacgtccttcgattcttcacggagtaccaggtagcggcggccgacagg
acgtccaatggcacaaatcgggcgagagaactacttatgcaacaaaaccacacatacttc
catcttctggttgctgagattaagaacccgaaccataagatcaattacttcatggaagca
tcacggttccattgggaagccaacgaccctgagattgtctccgacgtcttgttcgccatt
gccaacgtcatcagctttgcacgcaccacctacctcatgccagccttcgaggtgttgggc
cccctgcagatatccctagggcgcatgatcggcgatatcaccaggttcatggtgctgttt
accctggtactattcgccttcatggtgggcctgcacaacttgtactggtactacggggcg
cagaaaatcaagatggagatcaatggcaatctcgtcagcgttcacgcagcgaaagcattc
caaggtcctcataacctcgtttttgcagtcaaaaaatgtcaagttctagacagtgagcgt
ggcgacatatactgtacagacggcagcaaacgagatcccaacacgcccccagtgttcaag
tctaccttgtacgggtcgtctcatcacgacagcagcacgtccatcgtcgagagtgtcggg
atgtacctgttcggtatctaccacgtcgtcatcatcatcgtcctcatcaacatgctcatt
gctatgatgagccactccttcgaagacattcagaccgactgtgacgtggagtggaagttt
gcccgtacgaagctgtggttgaactacatggacgagggcagcaccctgcccgtccccttc
aacatgatcccgacgcccaagtccttctattacgtgtatatattctttaaagacttgata
aagcatagcaaaaatggattcctagaatatgaaaagaatagaaagcagacgtttctgaag
aagcgtcgagagacagtgtgcaaaacgttggacttaaagcctgatgagacgtcgtatata
gacatcatgcacaggctagtaaagagatacctcttcaagctggagagagctaaagatgaa
actgccttgaaagacatgggcaacatcagagcggaggaggtggagttcatagaagcccca
gacgttcccccgccaccaatacctagcgacacacccagccggatacccttcgccacgccc
cctataccagaggaggaaggggaggataactctaaagctgacggtcgggcctccgccctg
tcaaagaggaaggccagtaaccggagccatcacacccggcgaacgtccatggccaacgtt
cccatgacaaccaccctggctatcccccagctggacgccatccagaggtcccagaagctc
cttgacgtgcggctccagcacctgcaggccaacagcaaggagaacaaccgtctccaggac
gacgtggagttcatacgcaagttgatgacggagaaccaaaaagctttgtgtaatgtggtg
caggcgttggccaacattcagggggaaattgtcaacttggctcagtgcctaaagccagca
ccgaggcctcagtcaaacgccattcctaacgcccatgggcagactaacgcagtgtcgtcc
aatcgtgcttccaggaagagatccggtcctgaggaggacgataccaaggtctga
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