Haliotis rufescens (red abalone): 124152737
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Entry
124152737 CDS
T07893
Name
(RefSeq) ATP-dependent RNA helicase A-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124152737
03012 Translation factors [BR:
hrf03012
]
124152737
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124152737
5.6.2.6 RNA 3'-5' helicase
124152737
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124152737
Translation factors [BR:
hrf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124152737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ATPase
AAA_23
AAA_22
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
124152737
NCBI-ProteinID:
XP_048244808
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MGDIKQFLYAWLGKKKVTPDYDFSTGGPKHRMRFKCEIRVDGYDYVGVGNSTSKKDAQAN
AARDFCQYLVRRSEMVASEIPGLELTTAPPQPGADNFGEAPGLPGGRLQPHQTLGGADSK
PMGAPREFPMYQRGPPQAYLDRLAADKKVMEESEDVDLNADLHGNWTLENAKSRLHQFLQ
QHKIHTDYKYSMMGPDHNRSFMAEMNFYVKKMNTNIHAQEHGSNKQVASKSCALSLVRQL
YHMNVIEPYTGLKKKKDSEQLEPYDVAVSPELQTQIMQVLDKWGIQPVPRPHQPPLPAED
GSVPPVSLLSHVSLDEFEPAPKRSTPGVVPWSPPQSNWNPWTNCNIDEGPLAMASLEQVS
QDLYTSLEDQRNRDEQLQRMMSDRSKLPVFESHDYILQTIQRSPVTLIRGETGCGKTTQV
PQFILDQMVNEGRGADCGIFVTQPRRLSAVSIAERVANERCENLGVSVGYSVRFESVLPR
PYGALLYCTVGTLLRRLEGGLRGVSHVIVDEIHERDINTDFLLVLLRDMVRTYPELRVVL
MSATVDTSLFQDYFGDCEVVEVYGRVFPVQEYYLEDCIQMLNFVPPPNDRKRKKGGGGGG
GDDLPGDEEQEENCNLILSGDYSPQTKVAMAQLNEKELSFELIESILRYLKQLKVPGAVL
VFLPGWNLIFSLQKHLEGSPEFGSSSYRVLPLHSQIPREDQRRVFDPVPDGVTKIILSTN
IAETSVTIDDVVFVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRRGRAGRVRPGFSF
HLCSRARFDKLDQHTTPEIFRTPLHELALSIKLLRLGPIAQFLAKAVEPPPLDAVIEAEA
TLRDMRALDANDELTPLGKILAKLPIEPRLGKMIIFGCIFYVGDAMCTIAASTTFPEPFI
TPTDRRRLGWVHKSLSGSRCSDHVALLNAFQLWEEARSGGEDSEMYFCDQKSLSLQTLRM
TSEAKNQLRDILVNAGFPDESLMPMGFNFTGPDNRLDIAITLLSMGLYPNVCYHKEKRKV
LTTESRAALVHKSSVNCSNFEVKFPSPFFIFGEKIRTRAVSCKQMTMATPLQLLLFGARS
VTLQGDMVVLDNWINLRMEYDAAACVVALRPLLEALMVRSTKEPEGVAEPGPQEECLLAV
LRVMSRPHAGRFGLSQESGGNNMRGPPAKVPRMGGGGFGGGGGGGYSGGRGGYGGGGHGS
GGGGYWGRGGGGGGYGGGRGGGGYGGGGYGGGRGGGGGGYGGGGYGGGRGGRGGGGGFGG
GGSRYGGGGGGGGGFGRGRGFRGGQQGGFGSGGGGFSFGGGSGSGGSGGGDQD
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatcaagcagttcctgtatgcctggctggggaagaagaaggtgaccccagac
tatgacttcagtactgggggacccaaacatcgcatgaggttcaagtgtgagattcgtgtt
gacggctacgactatgtcggtgtggggaactccaccagcaagaaggatgcacaggccaac
gctgccagagacttctgtcagtatctcgtccgcagatcggaaatggtagccagcgaaata
cctgggctggagctgactacagcgccaccacagccaggggcagataactttggagaagca
cctggattaccaggaggacgtctccagcctcaccagactcttggtggcgctgacagcaag
ccaatgggtgcaccccgggagttccccatgtaccagagagggccgccacaagcatacctc
gacaggctggctgctgataagaaagttatggaagagtccgaggatgtcgacctgaatgct
gatctccatggcaactggacgctcgagaacgccaagagtcgacttcatcagtttttgcag
caacataagatacacacagactacaaatactccatgatgggccccgatcacaaccggagt
ttcatggctgagatgaacttctatgtgaagaaaatgaacacaaacatccatgcacaagaa
catggatctaacaagcaggtggcctccaagtcctgcgctctgtccctcgtccgacaactc
tatcacatgaacgtcatcgagccttacacaggtctgaagaagaagaaggattcggaacag
ttggagccttatgatgttgctgtcagccccgagttacagacccagatcatgcaggtgctg
gacaaatggggtattcagccagttcccaggcctcatcaaccccctctaccagcggaggat
ggctcggtccctcccgtgtccctcctttctcatgtctccctggatgagtttgagcctgcc
cccaagcggagcaccccgggggtggtgccctggtccccaccccagtcgaactggaacccc
tggaccaactgcaacatagacgagggaccactagcaatggccagtctggagcaagtgagt
caggacctttacacctccctggaggaccagcgaaaccgtgacgagcagcttcagaggatg
atgtccgatcggtcgaagctgccggtgttcgagtcccacgactacatcctccagacgata
cagcgaagccctgtgacactcatccggggggagactgggtgtggtaagactacacaggtg
ccgcagttcatcttggaccagatggtgaacgagggtcgcggtgccgattgtggcatcttc
gtcacacagcccaggaggttgagtgccgtgtctattgcagagcgagtcgccaacgagaga
tgtgagaaccttggcgtgtctgttggatacagtgtcagatttgagtctgtcctgcctcga
ccgtatggagctctgctgtactgtaccgttggaacgctgctgaggaggctggaaggagga
ttgaggggcgtgtctcatgtcatcgttgatgaaatccacgagagagatatcaatactgac
ttcctgcttgtgctactgagggacatggtgcgaacctaccctgagcttcgcgtagtgttg
atgtcggcaactgtggacacgtcgctattccaggactacttcggagactgcgaagtagtg
gaagtgtacggacgggtcttcccggtgcaagagtattacctggaggactgcatccagatg
ctcaacttcgtcccgcccccgaatgacaggaagagaaagaaaggaggaggaggaggaggg
ggggacgacctccctggagatgaagagcaagaggagaattgcaacctgattctgtcgggt
gactacagcccacagaccaaggtggccatggcgcagctcaacgagaaggagctgtcgttc
gagctgatcgagtccatcctgcggtacctgaagcagctgaaggtgccgggggcggtgctg
gtcttcctgccgggctggaacctcatcttctccctgcagaagcacctggagggcagtccc
gagtttggaagctcatcgtatcgcgtactcccccttcactcccagattcccagggaggac
cagcgccgagtctttgaccccgtgccagatggagtcaccaagatcatcttgtccaccaac
attgctgagaccagtgtgacgatagatgatgttgtgtttgtcatcgactcctgcaaagcc
aagatgaagctgttcacgtcccacaacaacatgactaactatgccactgtgtgggcatcc
aagaccaacctggagcagcgacgggggcgagcggggcgagtgaggcccggcttctctttc
cacctgtgtagcagggccagatttgacaaattggaccaacacacaacacccgagattttc
cgtactcctctccatgagcttgccttgtcaatcaaactactaagactgggtccgattgcc
cagttcctggccaaggccgtggagcccccacccctggatgccgtcattgaagctgaagct
actctgcgagatatgcgagcgctggacgcgaatgacgagctgacacccctggggaagatc
cttgccaaacttcccatcgagccccggcttggcaagatgatcatctttggatgtatcttc
tatgttggagatgcgatgtgcacgatagctgcaagtaccacattccctgagcccttcata
acaccgaccgaccggcggcgtctgggctgggtgcataagagtctgtccgggagccgatgc
agcgaccatgtggcgctactcaacgccttccaactgtgggaggaggccagatcgggcggt
gaggacagtgagatgtatttctgtgaccagaagtccctctcgctgcaaacactacgcatg
acgtctgaagccaagaatcagctgcgcgacatcctggtgaatgcaggcttcccggacgag
agcctgatgccgatgggcttcaacttcaccgggccggacaacagactggacattgccatc
acgttgctgtccatggggctgtaccccaacgtgtgctaccacaaggagaagcggaaagtg
ctgaccacggagagcagagccgccctcgtacacaagtcgtcggtcaactgcagcaacttc
gaggtcaagttcccgtcacccttcttcatctttggagagaagatcagaaccagggccgtt
tcctgcaagcagatgacgatggccacacctctacaactcctgctgttcggggcccgaagt
gtcactttacagggagacatggtagtgctggacaactggatcaacctccgcatggagtat
gatgcggcagcttgtgtggttgcgttgcgcccactgctggaggcgctgatggtgcggtca
acgaaggagccggagggtgtggcggagccggggccccaggaggagtgtcttctggctgtg
ctgagagtcatgtcccgcccacacgctggccgctttgggctcagccaggaatcgggaggc
aacaacatgcgaggaccccccgccaaagtgccccggatggggggagggggctttggtgga
ggaggaggaggtggatacagtggagggagagggggatatggtggaggaggacatggcagt
gggggaggagggtattggggtcgggggggaggaggaggaggatatgggggtggaagaggt
ggtggtggctatggcggtggtggttacggaggtggccggggaggaggaggaggaggatat
ggagggggcggttacggaggtggtcggggtgggagaggaggaggaggaggatttggtggg
ggtggaagtagatacggaggtgggggtggaggtgggggtggatttggacgtggaagggga
ttccgaggtgggcagcaaggtggatttgggagtgggggtgggggcttctcctttggtgga
ggaagtggcagcggaggaagtggtggtggagatcaggactaa
DBGET
integrated database retrieval system
