Haliotis rubra (blacklip abalone): 124260071
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Entry
124260071 CDS
T07967
Name
(RefSeq) guanine nucleotide exchange C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124260071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124260071
Membrane trafficking [BR:
hrj04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
124260071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Tea_helical
Motif
Other DBs
NCBI-GeneID:
124260071
NCBI-ProteinID:
XP_046550276
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MATGKGPPKLKLTGSNMSSGVVQVPLSTDIELSGDFELPTTPLSPSSAFSTSKVVKISQS
YIDAILLCHWDNILGPRLEHVWYVDGCSKPHNSTLRHICSQVLSGEICRDVSCSQIDYKF
YDMPDKSIVVPAFIFSAQTDHGLGMHAIAFVVPNSELSIYLKHHGLIQCWMTRLIGKFRM
FLNKNQCENGLNELTEWLQNCLEMLSSLQEFGLPATVQLLDTAFSPSHNLEQTFLRQAIA
SHLMTFGRSLVIGKLPERVNLVIHTLSMFNSECERAVSRRVIYPILWAYHHDLALQGSLK
SANGSFNLPMREMLCGQYPSSIIDVQNRDVKQSPHCQEHIIRHYETIKNELICLHYEHSN
AQDFNAGFYVVFYKQQTIRESLVQNLLNEISKLPAVCGVREAHIAQFMRLLQRKALSLIR
YVETETIFPFSNRGSVHPRGLKKIKTDFNLALEGDFRIVIATAEKLKPGFYHLLLGERKY
DVEHLPNMTDIL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagggaaaggtccccccaaattaaagttgactggaagcaacatgagttctgga
gttgtgcaggtaccgttgtctacagatattgaactgagtggcgattttgaacttccaaca
actccactgagtcccagttcagctttctctacatcaaaggttgtcaagatatctcagagt
tacatagatgcgatactgctttgccactgggacaatattcttggtccacgccttgagcat
gtgtggtatgttgatggatgctccaaaccacataacagcacgctacgccatatatgctca
caggttttgagcggcgaaatctgccgagatgtctcctgtagtcagatagactataagttc
tatgatatgccagacaagtctattgttgtgccagctttcatattctctgcccagacagat
catggcttggggatgcacgccatagcatttgttgttccgaactctgaacttagtatatac
ttaaaacatcatggacttatacagtgctggatgacaagactcattggcaagtttaggatg
tttctgaacaagaaccagtgtgaaaatggactaaatgaattgacagagtggcttcaaaac
tgtctggagatgttgtcgtcacttcaagaatttgggttgcccgcaactgtccagctccta
gatacagcattttctccctcccataacctggagcaaacattcctacgtcaagctattgcg
tcccatcttatgacctttggtcggagtctagtcataggcaagttgcctgagagagttaac
ctggtcattcacaccttgtccatgttcaacagcgagtgtgagagagctgtgtcacggcgg
gtcatctaccccattctctgggcttaccatcacgacctggcactgcagggtagtctcaag
tctgcaaacggctcattcaatctaccaatgagggagatgctgtgtggccagtacccgtct
agcatcattgacgtccagaaccgggacgtcaagcagtccccacactgccaggaacacatc
atccgacactatgagacaataaagaatgagcttatctgccttcattatgaacattccaat
gctcaagacttcaatgcaggcttctatgttgtgttctacaaacagcagactatccgggag
tcccttgttcaaaatctcctaaatgagatctctaagctgcctgctgtgtgtggagtgagg
gaggctcacatagcccagttcatgaggctgttgcagcgaaaggctctgagccttatcaga
tacgtggaaactgagacaattttccctttcagtaacagagggtcagtccatccaagagga
ctgaagaagataaaaactgactttaacctagccctggagggtgatttcagaatagttata
gcaacagctgagaagctgaagccaggattttaccacctgctcctcggggagcgaaaatat
gacgtagaacatcttccaaatatgacagacattttgtag
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