Haliotis rubra (blacklip abalone): 124271384
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Entry
124271384 CDS
T07967
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124271384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrj04040
]
124271384
Ion channels [BR:
hrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124271384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Ank
PKD_channel
Baculo_PEP_C
Prenylcys_lyase
SOGA1-2-like_CC
DUF7310
Motif
Other DBs
NCBI-GeneID:
124271384
NCBI-ProteinID:
XP_046562474
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MATKNQRKLKLLQDRMQAGLTEDERDFLQAAELGDIDAIKSLIETETVSVNCVDPQGRTA
LEAAVAANDEDIVHYLLGKVKDKTVHKALLCACDNDRDKISEIILLHPLYQERNVSATHE
QIWKIGSKSTSDHPQVDTLLREALLRAAKRNNFQIVKQLMLMGAHLDPPHDYFCNCSECT
TQRSEDFKVYTNKRLDTYSAMASPAYISLTEEDPIMSAFKLSQAFKRMAEIESEFKVIYN
DLANQVETFTLALLDQCHSSDEVKAVLSGKPDLPEEDADDDEENDILPMLSTAIRMEQKR
FVAHPQCQAQIAELWYSGVPFLRYLNRFTYLMLAIPVGIVMVPILSIIYLIAPWSKVTVI
LDTPLMRFLSYTCSYLSFLVFVMVTKLKLTEAFDSFACDEQHPYVFAIITILLMWIFGLI
WEECKQIWSAGAKDYFRSLWNVVDSLMLSMLLASFVLEIVTPIRLHQVIQGSSENGSTAT
PLCTLIADGDMSLVEFCTIGRKDNVSVIWEPEWIPDPELLSDILFTFGTILSIGRFSFIM
PANEALGTMLVSFHRTINDLLKLCGMFILVLIAFASGLSALYAPSKCRNRSFGSFEATIS
TLTWSMFGMGDSSAPATDGQGPLASLTNNPHRDAGVTTIGYYLYAIYVFAAMIVLLNLLI
AVMSNTFEEVQGVSDVEWKFARTELWLTFIEPGSPVPPPFNVIPSPKSIVNCFRYCFSSC
SCAKKPEPEPKTFKYAAVQDYHSFDETSDLELSNIDKSDTKSECSVSSMKQHNRQDLYCI
LIRRYTRDVERQRSEGDDAPHDASDDMLRKLIERVTSKIEKKIEELYSRVTNVESNVNNV
QEGEGDIVKLQVEHTTLIKDEGRKRELEVDRFVHMLDQAKLELLSRMEAERIEVIRIWEE
QLREVLRRLDDSRRRVADRVADLEALHAADEAARRASGQQRPRRTGHDE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagaaccagcggaagctgaaacttctgcaggatcgtatgcaagcgggtttg
acagaggacgagagggatttcttacaggccgccgagctcggggacatcgatgctatcaag
agtcttatagagacagagactgtctctgtaaactgtgtggatccacaaggacgtactgct
ctagaagcagctgtagcggctaatgatgaagacattgttcattatcttctgggtaaggtg
aaggacaagaccgtccacaaggctctgctgtgtgcctgcgacaatgacagggacaagatc
agtgagatcatacttctgcatcctctgtatcaggagaggaatgtttcagcaacccatgaa
cagatctggaagattggaagtaagtcgacgtctgatcatcctcaggttgatacccttctt
agagaagctctgctcagggcggccaagaggaacaatttccagattgtcaaacagctgatg
ttgatgggggctcatttggaccctccacatgactacttctgtaactgtagcgagtgtacc
acccagaggagtgaggactttaaggtgtacaccaacaagcgtctggacacgtatagcgcc
atggctagccctgcatatatctctctgacggaagaggaccccataatgtctgcctttaaa
ctcagccaggccttcaagcgtatggctgagattgagtcagagttcaaggtgatctacaac
gaccttgcaaatcaagtcgaaacattcaccttggccttgctagatcaatgccatagttca
gacgaggtcaaagccgttctgagtggcaagccagatctacctgaagaggacgctgatgat
gatgaagaaaacgacatcctgccgatgctcagtactgcaatacgaatggagcagaaacgg
tttgtcgcccaccctcagtgtcaggcgcagatagcagagctatggtacagtggtgtacca
tttcttcggtacctgaacaggttcacctacctgatgctagccatccccgtcggcatcgtg
atggttccaatcctgtccattatctacctcatagcaccgtggagcaaggtgacagtcatc
ctggacactcctttgatgagatttctcagctacacctgctcatacctgtcctttttggtg
tttgtcatggtaacgaaactgaagctgacagaggccttcgacagctttgcctgtgacgag
cagcatccgtatgtgtttgctatcatcaccatcctccttatgtggatctttggtttgata
tgggaggagtgcaaacagatctggtccgcaggcgcaaaagactacttccggtctctctgg
aacgttgtcgattctctgatgttgagcatgctgttagcatcctttgtcttggagatcgtc
acaccgatcagattacaccaggtgatccagggaagcagtgagaacggctcgacagccacg
cccctgtgcaccctcatcgccgacggcgacatgtcattggttgaattctgcaccattggc
aggaaggataatgtatcagtgatatgggagccggagtggataccagacccggagctactg
tcagacatcctttttacatttggcaccatcctcagcattggtcggttctccttcatcatg
ccagccaatgaggcccttggtaccatgctggtgtccttccatcggacaatcaacgacctg
ctgaaactgtgtggaatgttcatccttgttcttatagcatttgcctcgggattatcagca
ttgtacgccccgagcaagtgtaggaatagaagctttggctcgtttgaggccactatatcc
accctgacttggagtatgttcggtatgggagattcctcggccccagctacagatggtcag
gggccactggcctctctcaccaataaccctcacagggacgccggcgtgacgacaatcggc
tactacctgtacgccatctatgtatttgcggccatgatagtactgctcaacctcttgatt
gctgtcatgtccaacacctttgaagaagttcagggcgtgagtgatgtggagtggaagttt
gcccgtactgagttgtggttgaccttcattgaacccggaagtcccgtcccgccgccattc
aacgtcatcccaagccccaagagcattgtcaactgcttccggtactgcttctcctcctgt
tcctgcgccaagaaaccggagccggaacccaagacatttaaatatgctgctgttcaggat
taccactcatttgacgagacaagtgaccttgagttatccaatatcgacaaaagtgataca
aaaagcgaatgttcggtcagctccatgaagcaacataacagacaggacctgtactgtatc
ctaatcagacgctacacaagagatgttgagagacagagaagtgaaggggatgacgcacca
cacgatgcctctgacgatatgttgcggaaactgatcgaaagggtgacctccaagatcgag
aagaagatagaggagctctattctcgtgtcacgaatgttgaaagcaacgtgaacaacgtc
caggaaggcgaaggcgacatcgtgaagctccaggtggaacacacaaccctgatcaaggac
gaaggccgaaagagggaactggaagttgataggtttgtccatatgctggatcaagccaaa
ctggagcttctgtcccgcatggaagcagaaagaatcgaagttatacgaatctgggaagag
caactacgggaagtgctgcgtcgactcgacgatagcagaagacgggtggctgatcgtgtg
gctgatttagaagcactacacgcagcggatgaagctgctagaagagcatcagggcaacag
agaccccgtagaactggacacgatgaatag
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